Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU1-35P-201ENST00000362782 153 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5-8SP7-201ENST00000363443 155 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 SNORD15B-201ENST00000384714 146 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS4XP3-201ENST00000398541 413 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 MTCO3P4-201ENST00000419236 787 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 IPO7P1-201ENST00000442031 636 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AL031659.1-201ENST00000447075 539 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC025518.1-201ENST00000479856 347 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL7P38-201ENST00000488396 739 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC090096.1-201ENST00000489168 390 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC008427.1-201ENST00000503102 655 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 CUL1P1-201ENST00000509510 2425 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC107222.1-201ENST00000510899 637 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC016065.2-201ENST00000514530 444 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC104115.2-201ENST00000523026 687 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC012321.1-201ENST00000561622 1588 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC087499.8-201ENST00000578406 226 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 RN7SL600P-201ENST00000581811 299 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR4276-201ENST00000584832 70 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC006130.2-201ENST00000586202 326 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC103881.1-201ENST00000603476 538 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AL359715.4-201ENST00000606629 1436 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC015982.1-201ENST00000608113 465 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC090115.4-201ENST00000609970 188 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AL445528.2-201ENST00000620582 470 ntBASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.53□□□□□ -2.16
CHKB-CPT1BH3BT56 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL049780.3-201ENST00000624612 1583 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 MIRLET7G-201ENST00000362280 84 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU6-213P-201ENST00000384051 104 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR524-201ENST00000385242 87 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORA57.1-201ENST00000391227 145 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL035419.1-201ENST00000397037 564 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 U3.42-201ENST00000408746 214 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 RN7SKP111-201ENST00000410349 271 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL139132.1-201ENST00000431587 344 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 RPL5P13-201ENST00000462840 709 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC078857.1-201ENST00000469870 667 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC004062.1-201ENST00000509926 645 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC092593.2-201ENST00000513866 913 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL133271.1-201ENST00000538229 291 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 HPRT1P3-201ENST00000539521 576 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 OR7K1P-201ENST00000546439 926 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL391156.1-201ENST00000554965 554 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC011445.2-201ENST00000599274 173 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AL451086.1-201ENST00000605596 223 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC073657.2-201ENST00000605661 303 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC048341.3-201ENST00000619323 491 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 AC090740.1-201ENST00000623193 2262 ntBASIC1.52□□□□□ -2.17
CHKB-CPT1BH3BT56 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms