Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC007496.3-201ENST00000624987 3443 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC046144.1-201ENST00000478559 1853 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 RAC1P3-201ENST00000416129 580 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 PAICSP7-201ENST00000419829 962 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL009174.1-201ENST00000426577 416 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 RPL23AP15-201ENST00000450202 459 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 MTND2P39-201ENST00000457230 764 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 RPL27AP5-201ENST00000469428 449 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 RPS17P11-201ENST00000474297 293 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 ARL2BPP6-201ENST00000512757 439 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 RNU6-202P-201ENST00000515998 96 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 IGHV3-32-201ENST00000519182 355 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC090281.1-201ENST00000523019 276 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 VN1R79P-201ENST00000593540 513 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 VN1R88P-201ENST00000596787 292 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC011492.1-201ENST00000600023 315 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL020997.3-201ENST00000602843 359 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 LLPHP1-201ENST00000603571 367 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC091488.1-201ENST00000604239 660 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL392112.1-201ENST00000605115 829 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC099785.1-201ENST00000605697 437 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC105429.2-201ENST00000610567 517 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AL138955.1-201ENST00000622881 1040 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 AC103798.2-201ENST00000624292 632 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 BX649567.1-201ENST00000642071 1134 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 RPS4XP5-202ENST00000449995 1334 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 ZNF33CP-201ENST00000432492 2030 ntBASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
SMIM28A0A1B0GU29 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SMIM28A0A1B0GU29 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.4□□□□□ -1.86
SMIM28A0A1B0GU29 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SMIM28A0A1B0GU29 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SMIM28A0A1B0GU29 MIR422A-201ENST00000362286 90 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AP002088.1-201ENST00000382740 395 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AL603865.2-201ENST00000401679 213 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 DNAJC19P6-201ENST00000401853 280 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AL355143.1-201ENST00000407101 841 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC004865.1-201ENST00000442276 1003 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 SEPT14P24-201ENST00000447236 180 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC092045.1-201ENST00000495716 1231 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 SNX5P1-201ENST00000505757 1041 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 FABP5P12-201ENST00000515543 389 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 IGKV2-23-201ENST00000518729 323 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC006518.2-201ENST00000542513 940 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC004217.3-201ENST00000551552 878 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 NIFKP8-201ENST00000560500 874 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC011471.1-201ENST00000585766 187 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC008507.2-201ENST00000588402 1176 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 PRELID3BP8-201ENST00000604148 295 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AL162274.2-201ENST00000614406 332 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC091903.1-201ENST00000624322 454 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 MIR622-201ENST00000638396 96 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 AC006927.2-201ENST00000639256 389 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 OR5BR1P-201ENST00000524992 1330 ntBASIC3.4□□□□□ -1.87
SMIM28A0A1B0GU29 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms