Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 SNORA40.14-201ENST00000516543 86 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AP003396.4-201ENST00000527574 265 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 DEFB108D-201ENST00000527787 222 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AP004609.2-201ENST00000532177 190 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AL451044.1-201ENST00000604867 238 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 RPL12P48-201ENST00000605620 304 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 SNHG22-203ENST00000617833 660 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AP001052.1-201ENST00000626421 99 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC073488.6-201ENST00000632293 754 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC104966.1-201ENST00000467010 1464 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 RNU6-715P-201ENST00000365204 103 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 SNRPEP6-201ENST00000407465 277 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AL645568.3-201ENST00000433683 316 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AL132765.1-201ENST00000434165 553 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 RPS17P8-201ENST00000434525 335 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 CYCSP34-201ENST00000458172 304 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 CYCSP25-201ENST00000525280 316 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AC040926.1-201ENST00000530195 238 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AC036111.2-201ENST00000533247 901 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AC025423.5-201ENST00000550230 219 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 RPSAP75-201ENST00000605848 301 ntBASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HRH3Q9Y5N1 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AL031119.1-201ENST00000404707 1879 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AL157777.2-201ENST00000258070 137 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 RN7SKP115-201ENST00000363177 317 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 Y_RNA.477-201ENST00000384352 108 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC097374.1-203ENST00000400783 485 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AL445189.1-201ENST00000405722 338 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 RNU2-38P-201ENST00000410856 79 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 UBE2FP1-201ENST00000416536 447 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC094019.1-201ENST00000434678 472 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 MTCO3P8-201ENST00000453691 755 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC053481.1-201ENST00000467217 306 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC087884.1-201ENST00000469738 328 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC084198.1-201ENST00000477747 402 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC011005.2-201ENST00000487324 359 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 HMGB1P35-201ENST00000503360 598 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC093852.1-201ENST00000503587 266 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 SNORA40.15-201ENST00000516884 107 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC073916.1-201ENST00000545095 130 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 HMGB3P26-201ENST00000560051 582 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC023968.1-201ENST00000560719 475 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 RPL23AP84-201ENST00000571193 464 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC097467.4-201ENST00000605504 141 ntBASIC5.8□□□□□ -1.48
HRH3Q9Y5N1 AC096772.1-201ENST00000609146 564 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms