Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC105918.1-201ENST00000474399 838 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 RPL31P61-201ENST00000496160 376 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 SNORA31.21-201ENST00000517180 77 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC007342.9-201ENST00000623877 1385 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 RHOT1P2-201ENST00000366423 333 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC245291.1-201ENST00000419501 328 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC063952.1-203ENST00000634410 658 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC110491.1-201ENST00000562191 2010 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AL157385.1-201ENST00000446973 268 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AL031584.1-201ENST00000447169 754 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AL353705.4-201ENST00000449661 238 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 AP001542.2-201ENST00000593141 364 ntBASIC1.17□□□□□ -2.22
MACF1Q9UPN3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MACF1Q9UPN3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC002543.1-201ENST00000299783 1954 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC023128.2-201ENST00000420880 1223 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AL513321.1-201ENST00000441175 761 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC092155.2-201ENST00000454675 477 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 RNA5SP121-201ENST00000516537 101 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 IGLV3-17-201ENST00000519099 244 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC027216.1-201ENST00000577726 685 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 IMMP1LP1-201ENST00000605170 488 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 MAPK10-286ENST00000641208 8747 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC012065.2-201ENST00000421295 375 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC005534.2-201ENST00000431047 433 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 BTG3P1-201ENST00000435859 716 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 MTCO1P53-201ENST00000441633 699 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 GTF3AP5-201ENST00000442645 697 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 NIPA2P5-201ENST00000452282 464 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 RPL23AP42-201ENST00000471152 471 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 OR4G11P-201ENST00000492842 939 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AL022400.1-201ENST00000423946 935 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC093392.2-201ENST00000450682 337 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 RPL23AP49-201ENST00000492925 468 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 MTND4P10-201ENST00000446199 1363 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AL035551.1-201ENST00000446931 348 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AL109741.3-201ENST00000561748 592 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 BNIP3P16-201ENST00000589779 534 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC007566.2-201ENST00000603642 413 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC116158.1-201ENST00000560231 2129 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 TAB3P1-202ENST00000452645 1634 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 RN7SKP199-201ENST00000410325 305 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 PRDX3P4-201ENST00000470828 747 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 HMGN1P28-201ENST00000521340 364 ntBASIC1.16□□□□□ -2.22
MACF1Q9UPN3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.16□□□□□ -2.22
MACF1Q9UPN3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms