Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 FRG1CP-201ENST00000358464 769 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AC069218.2-201ENST00000411665 344 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 MTCYBP32-201ENST00000427945 1084 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 HMGB3P6-201ENST00000444896 598 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AC023141.12-201ENST00000512399 199 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 RNA5SP135-201ENST00000517019 125 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AC091163.3-201ENST00000518269 1144 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AC010653.1-201ENST00000571108 881 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AC105429.2-201ENST00000610567 517 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 AL592148.2-201ENST00000612210 372 ntBASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC6.69□□□□□ -1.34
SHROOM4Q9ULL8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AC116096.1-201ENST00000566804 2314 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 RNU6-1243P-201ENST00000364028 107 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 MIR153-1-201ENST00000384914 90 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AL121978.1-201ENST00000402778 359 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 ZNF603P-201ENST00000405613 487 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 RN7SKP53-201ENST00000411337 315 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AC098824.1-201ENST00000453565 980 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 U3.44-201ENST00000458938 192 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 DYNLL1P6-201ENST00000503440 264 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AC096571.1-202ENST00000506634 735 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 RN7SKP234-201ENST00000517173 224 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 MTCYBP28-201ENST00000566728 1132 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 RPL12P50-201ENST00000603116 116 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AC007390.2-201ENST00000606229 3803 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AP005137.2-201ENST00000609238 400 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 MFSD8-245ENST00000641743 948 ntBASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC6.68□□□□□ -1.34
SHROOM4Q9ULL8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AC000367.1-201ENST00000452711 1766 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 OTUD4P1-201ENST00000237841 3067 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AL358794.1-201ENST00000445689 381 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AL162388.1-201ENST00000450912 352 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AC004069.2-201ENST00000505438 1114 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 MIR4276-201ENST00000584832 70 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AL512506.2-201ENST00000624472 458 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AC010608.3-201ENST00000625048 527 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 MTND5P31-201ENST00000419366 1374 ntBASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SHROOM4Q9ULL8 AC027290.2-201ENST00000623210 18662 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 RPL31P45-201ENST00000419532 356 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC096632.1-201ENST00000427395 310 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 RPL36P19-201ENST00000430744 301 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 GTF2IP3-201ENST00000433887 494 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms