Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 RPL21P65-201ENST00000406094 466 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 LUZP4P1-201ENST00000415420 344 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 RPS12P23-201ENST00000419579 400 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC233981.1-201ENST00000423224 461 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AL691449.1-201ENST00000426570 421 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 RPS11P1-201ENST00000451072 473 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 RPS27AP8-201ENST00000452665 445 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 RPL5P32-201ENST00000454085 879 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 MTCO3P16-201ENST00000454456 754 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC005798.1-201ENST00000513715 387 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 RNU6-1261P-201ENST00000517194 104 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 OR5AK1P-201ENST00000524837 922 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC091516.1-201ENST00000549191 703 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 DUXAP11-201ENST00000603858 526 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC072039.2-201ENST00000608883 439 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AC027287.1-201ENST00000553115 1453 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 CDR1-202ENST00000625883 1485 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 SPRR2C-201ENST00000290702 219 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RNU1-18P-201ENST00000363062 164 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RNU6-931P-201ENST00000363850 107 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RNU6-553P-201ENST00000364047 96 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RNU1-85P-201ENST00000364127 164 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 SNORA4.1-201ENST00000364263 144 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RNU6-444P-201ENST00000383988 108 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 HLFP1-201ENST00000402375 499 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AL021407.1-201ENST00000404531 386 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 HNRNPDP2-201ENST00000406475 478 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RNU4-6P-201ENST00000410804 122 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 BX119904.4-201ENST00000424402 301 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AL390023.1-201ENST00000428836 262 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 OR4C10P-201ENST00000434991 931 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC118469.1-201ENST00000442943 488 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 MTND2P4-201ENST00000445034 1004 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RN7SL93P-201ENST00000463035 293 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC013828.1-201ENST00000481845 158 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 RPL30P11-201ENST00000495304 339 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC004069.2-201ENST00000505438 1114 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 XKRY-201ENST00000510392 1100 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 NARSP2-201ENST00000518524 679 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 SOD1P3-201ENST00000518682 454 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC087369.1-201ENST00000520775 996 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AL512347.1-201ENST00000566420 503 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC105129.3-201ENST00000605455 485 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AC008083.4-201ENST00000615076 444 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 AL713922.2-201ENST00000619384 716 ntBASIC4.04□□□□□ -1.76
PCDH9Q9HC56 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms