Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MTCO3P41-201ENST00000414801 328 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP4Q99569 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 MTCO1P54-201ENST00000430139 712 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AC010881.1-201ENST00000433830 235 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AC069285.2-201ENST00000440210 275 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 DSTNP2-201ENST00000504533 515 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 AC010625.1-201ENST00000511296 403 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 OR4R3P-201ENST00000525084 838 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AC005832.3-201ENST00000537929 631 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.04□□□□□ -1.76
PKP4Q99569 AC027807.1-201ENST00000559921 996 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 MIR378J-201ENST00000611988 109 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 MIR8059-201ENST00000620427 81 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP4Q99569 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PKP4Q99569 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PKP4Q99569 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP4Q99569 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PKP4Q99569 MAPK10-372ENST00000641954 3413 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.03□□□□□ -1.76
PKP4Q99569 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP4Q99569 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PKP4Q99569 AC016588.2-201ENST00000632484 3021 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.03□□□□□ -1.76
PKP4Q99569 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PKP4Q99569 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 RNA5SP388-201ENST00000362584 119 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 Y_RNA.559-201ENST00000384686 107 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 MIR16-1-201ENST00000385271 89 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PKP4Q99569 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP4Q99569 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 MTCYBP24-201ENST00000420387 1106 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 MRPS36P1-201ENST00000421291 307 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 COX6CP17-201ENST00000421389 185 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC233981.1-201ENST00000423224 461 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC093698.1-201ENST00000423843 571 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AL022400.1-201ENST00000423946 935 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 DPRXP1-201ENST00000426312 460 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 RPL36P19-201ENST00000430744 301 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP4Q99569 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.03□□□□□ -1.76
PKP4Q99569 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 MTND4P6-201ENST00000438297 472 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC006011.1-201ENST00000442758 349 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.03□□□□□ -1.76
PKP4Q99569 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP4Q99569 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.03□□□□□ -1.76
PKP4Q99569 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 RAD23BP3-201ENST00000454157 1152 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 USP9YP10-201ENST00000454868 628 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP4Q99569 RNA5SP246-201ENST00000458909 119 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 RPL5P24-201ENST00000463742 885 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC010307.1-201ENST00000467206 836 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 RPL7P1-201ENST00000468161 747 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 RPL7P9-201ENST00000468715 747 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC010618.1-201ENST00000469924 477 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.03□□□□□ -1.76
PKP4Q99569 AC006517.1-201ENST00000480485 328 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 RPS27AP13-201ENST00000498403 237 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC078918.1-201ENST00000498515 228 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP4Q99569 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP4Q99569 USP9YP5-201ENST00000511770 630 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKP4Q99569 RNA5SP154-201ENST00000516193 111 ntBASIC4.03□□□□□ -1.76
PKP4Q99569 RNU6-678P-201ENST00000516832 109 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms