Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 ELF2P3-201ENST00000445099 1506 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 AL672167.1-206ENST00000356293 943 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 AC092013.1-201ENST00000438795 332 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 RPL7P31-201ENST00000450192 724 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 AL645939.1-201ENST00000453429 797 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 SEPT7P6-201ENST00000469999 1143 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 TRBV12-1-201ENST00000479785 344 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 AC084757.1-201ENST00000559987 490 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 ZNF861P-201ENST00000588126 639 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 AC096586.2-201ENST00000610260 441 ntBASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.16□□□□□ -1.9
CDK5RAP2Q96SN8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDK5RAP2Q96SN8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 MTCO1P14-201ENST00000441695 1559 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 AC011155.1-201ENST00000316512 456 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 SNORD62.1-201ENST00000362541 86 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 AC004987.3-201ENST00000413879 771 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 AC007390.1-201ENST00000415722 356 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 BX276092.4-201ENST00000452056 248 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 AC100870.1-201ENST00000522035 505 ntBASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDK5RAP2Q96SN8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 AL451074.5-201ENST00000415894 435 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 MRPL50P2-201ENST00000416821 482 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 RPL23AP74-201ENST00000437246 471 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 AL353093.1-201ENST00000441292 436 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 AC025260.1-201ENST00000548858 430 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 AL391156.1-201ENST00000554965 554 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 AC079089.3-201ENST00000603094 673 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 AC016717.2-201ENST00000609089 5141 ntBASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP2Q96SN8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 SNORA70B-201ENST00000384210 135 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 OR2B8P-201ENST00000432841 938 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 RPL21P112-201ENST00000434403 463 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 HMGB3P21-201ENST00000452483 547 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC068722.2-201ENST00000618734 544 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC008264.2-201ENST00000610193 3731 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 MIR181A2-201ENST00000384863 110 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 RPL7P53-201ENST00000421245 739 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 MYL8P-204ENST00000431574 518 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 USP9YP7-201ENST00000436723 430 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 GAPDHP27-201ENST00000447427 1020 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 USP9YP32-201ENST00000452432 430 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC087385.1-201ENST00000475062 312 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC147055.1-201ENST00000509261 750 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC017037.2-201ENST00000513850 890 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 AC007423.1-201ENST00000605009 627 ntBASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP2Q96SN8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 RN7SKP223-201ENST00000410582 62 ntBASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 MIR4716-201ENST00000579628 84 ntBASIC3.12□□□□□ -1.91
CDK5RAP2Q96SN8 DNAJC19P3-201ENST00000594491 331 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms