Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNF138P1-201ENST00000502765 546 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 APOOP4-201ENST00000513530 597 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 RN7SKP116-201ENST00000516902 319 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AP003717.3-201ENST00000544832 1180 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC011611.1-201ENST00000552179 197 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.12□□□□□ -1.91
COL21A1Q96P44 VN1R92P-201ENST00000598511 928 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AL671309.1-201ENST00000603750 544 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC096586.1-201ENST00000610267 561 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AL118556.2-201ENST00000614375 824 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 U6.105-201ENST00000637379 88 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AL079305.1-201ENST00000623159 3008 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AF127577.6-201ENST00000623352 2191 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC010733.2-201ENST00000589496 5702 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 MFSD8-213ENST00000641134 1327 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.12□□□□□ -1.91
COL21A1Q96P44 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL21A1Q96P44 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL21A1Q96P44 SNORD56.4-201ENST00000363883 71 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 RNU6-1243P-201ENST00000364028 107 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 SNORA7.2-201ENST00000364446 145 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 DSTNP4-201ENST00000399472 474 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 ATP5F1P6-201ENST00000402768 767 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 SFR1P1-201ENST00000403720 688 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 RNU2-37P-201ENST00000410695 177 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL21A1Q96P44 OR1AA1P-201ENST00000419597 916 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC012498.1-201ENST00000424037 437 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 VN1R42P-201ENST00000424651 344 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AL159987.2-201ENST00000432754 307 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC006994.1-201ENST00000438212 839 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC092170.1-201ENST00000440211 356 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 MTND1P33-201ENST00000446251 917 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AL500527.1-201ENST00000448532 255 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AL353718.1-201ENST00000451028 517 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 RPS20P32-201ENST00000456044 356 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 MTND2P30-201ENST00000456663 382 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 RPL21P10-201ENST00000463521 490 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC093663.1-201ENST00000497190 394 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL21A1Q96P44 RNU2-58P-201ENST00000516403 183 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 SNORA70.24-201ENST00000517233 118 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 CCNG2P1-201ENST00000549521 1000 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 NCAPGP2-201ENST00000557911 754 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC015917.1-201ENST00000579654 510 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 SRGNP1-201ENST00000603392 451 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC007179.3-201ENST00000604976 235 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AL163051.2-201ENST00000618976 735 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 AC127502.3-201ENST00000636170 1206 ntBASIC3.11□□□□□ -1.91
COL21A1Q96P44 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL21A1Q96P44 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
COL21A1Q96P44 CR383658.2-201ENST00000547576 1525 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL21A1Q96P44 RNU1-33P-201ENST00000364249 162 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 MIR607-201ENST00000385241 96 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 RPS3AP25-201ENST00000411660 793 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC007899.1-201ENST00000412776 775 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 RPS3AP9-201ENST00000417027 792 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC073508.1-201ENST00000428866 656 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 RPL21P112-201ENST00000434403 463 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC005019.1-201ENST00000436455 431 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 CYCSP43-201ENST00000438233 310 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC002542.1-201ENST00000440683 193 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 RNFT1P2-201ENST00000443064 757 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 PRDX3P3-201ENST00000447765 522 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AL034418.1-201ENST00000448675 860 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms