Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC244098.2-201ENST00000422068 99 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 UBE2V1P5-201ENST00000440070 405 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 SLC31A1P1-201ENST00000451221 567 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 snoU13.24-201ENST00000458998 104 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 ST13P14-201ENST00000474095 734 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC008565.1-201ENST00000509046 885 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 MIR4504-201ENST00000577413 92 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC090616.5-202ENST00000582111 297 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 SNRPGP15-201ENST00000600149 222 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC125494.3-201ENST00000602759 455 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AL162713.1-201ENST00000604480 262 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AL591516.1-201ENST00000611326 274 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC005156.1-201ENST00000613371 573 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 MIR3651-201ENST00000630427 90 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC083865.1-201ENST00000636634 831 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC011978.2-201ENST00000569835 2054 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AC118273.1-201ENST00000525324 3006 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AL079305.1-201ENST00000623159 3008 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 RNU6-543P-201ENST00000362576 108 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 SNORA7.2-201ENST00000364446 145 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 EIF5P1-201ENST00000400019 1231 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 ARL2BPP3-201ENST00000421226 480 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AL513175.1-201ENST00000431492 780 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 MTND4LP7-201ENST00000431728 294 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 TRIM60P13-201ENST00000432350 1283 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 HMGB1P12-201ENST00000438594 598 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AC233982.1-201ENST00000451247 436 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 RPL23AP23-201ENST00000452590 471 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 CABYRP1-201ENST00000465493 1045 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 RPL23AP55-201ENST00000498163 452 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 RPL12P22-201ENST00000519073 490 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AC093014.1-201ENST00000548926 724 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 CKS1BP1-201ENST00000555221 240 ntBASIC3.29□□□□□ -1.88
C9orf72Q96LT7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
C9orf72Q96LT7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 RNU6-252P-201ENST00000363232 107 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 RNU6-1243P-201ENST00000364028 107 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 SNORA51.2-201ENST00000364595 132 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC092745.2-202ENST00000411880 369 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 HMGB3P6-201ENST00000444896 598 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 BTF3P5-201ENST00000457252 467 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 RPL7P38-201ENST00000488396 739 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 RN7SKP244-201ENST00000516513 307 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 SYF2P1-201ENST00000550658 413 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 OR4T1P-201ENST00000554933 911 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 MIR3690-201ENST00000580266 75 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC079880.2-201ENST00000603790 1213 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AL009028.1-201ENST00000604895 802 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms