Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNU7-143P-201ENST00000516781 65 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 EEF1A1P37-201ENST00000522748 715 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 MTCYBP41-201ENST00000528913 1123 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC012417.1-201ENST00000582307 1039 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC006329.2-201ENST00000611491 394 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC079395.3-201ENST00000615161 484 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC022079.1-201ENST00000621546 602 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 U6.101-201ENST00000637707 76 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 MIR1322-201ENST00000638013 71 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 MFSD8-216ENST00000641147 4009 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 Y_RNA.192-201ENST00000363977 102 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 RNU1-132P-201ENST00000364300 164 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 RN7SKP182-201ENST00000410772 298 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 RPL30P2-201ENST00000414021 291 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AL592310.1-201ENST00000414330 671 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 COX6B1P7-201ENST00000430845 235 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC092427.1-201ENST00000439177 601 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 RPL31P13-201ENST00000484151 370 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 MTCO3P35-201ENST00000485582 781 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 RN7SL271P-201ENST00000487601 295 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 RPL29P14-201ENST00000495837 428 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC079395.1-201ENST00000510981 262 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC104986.1-201ENST00000517978 436 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AP004371.1-201ENST00000525240 214 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 HSPE1P3-201ENST00000559254 309 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 OR4K7P-201ENST00000580232 945 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC022662.1-201ENST00000580252 331 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 MIR4637-201ENST00000582405 84 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC103881.1-201ENST00000603476 538 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AL450336.1-201ENST00000605180 586 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AL451074.6-201ENST00000608512 729 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC092628.2-201ENST00000622492 339 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AP000346.3-201ENST00000622821 210 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC048347.1-201ENST00000624621 427 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC019226.2-201ENST00000625973 424 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC116667.1-201ENST00000604855 2072 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RFT1Q96AA3 AC091152.2-201ENST00000591628 2569 ntBASIC3.51□□□□□ -1.85
RFT1Q96AA3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RFT1Q96AA3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFT1Q96AA3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.5□□□□□ -1.85
RFT1Q96AA3 RNA5SP258-201ENST00000362750 119 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 Y_RNA.465-201ENST00000384293 102 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 MIR192-201ENST00000384915 110 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 MIR607-201ENST00000385241 96 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 ANAPC10P1-201ENST00000395991 556 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 SNRPEP2-201ENST00000397592 279 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 MIR1251-201ENST00000408552 70 ntBASIC3.5□□□□□ -1.85
RFT1Q96AA3 RNU4-78P-201ENST00000410940 126 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms