Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC091903.1-201ENST00000624322 454 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 BX005019.1-201ENST00000561881 1810 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 RPL21P3-201ENST00000395517 478 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 ISCA1P2-201ENST00000438679 421 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC146507.2-201ENST00000460608 476 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 SCGB1D5P-201ENST00000515134 247 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AL354950.1-201ENST00000614150 568 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AL592437.2-201ENST00000421655 2434 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AL138827.1-201ENST00000402666 306 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 RPL9P32-201ENST00000464118 620 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 RN7SL499P-201ENST00000481141 276 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC078817.1-201ENST00000492623 435 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AL031736.2-201ENST00000426573 787 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 FAM103A2P-201ENST00000444122 354 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC125238.1-201ENST00000448842 249 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AP000926.1-201ENST00000479573 241 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 UBTFL10-201ENST00000528532 562 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 RPL36AP33-201ENST00000450395 310 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC026634.1-201ENST00000634369 198 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 AC009452.1-201ENST00000640823 606 ntBASIC1.88□□□□□ -2.11
ALMS1Q8TCU4 XPOTP1-201ENST00000443317 2398 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 SKINT1L-201ENST00000401057 817 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 RNA5SP458-201ENST00000516188 119 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 TRAV37-201ENST00000553906 342 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 TAB3P1-202ENST00000452645 1634 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 FAM133CP-201ENST00000332869 704 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 SRIP1-201ENST00000489235 288 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 RNU6-1334P-201ENST00000516032 105 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 SNORA3.2-201ENST00000408221 125 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 RPL23AP15-201ENST00000450202 459 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 RPL23AP31-201ENST00000456160 467 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 HMGN1P18-201ENST00000457642 277 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 GAPDHP39-201ENST00000481866 979 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 AC091488.1-201ENST00000604239 660 ntBASIC1.87□□□□□ -2.11
ALMS1Q8TCU4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 U3.11-201ENST00000364476 212 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 RN7SKP192-201ENST00000411291 327 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 ARF4P2-201ENST00000430209 526 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 USP9YP7-201ENST00000436723 430 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 GAPDHP27-201ENST00000447427 1020 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 USP9YP32-201ENST00000452432 430 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AC108078.3-201ENST00000502633 489 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AC006445.2-201ENST00000510061 472 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 MTND5P19-201ENST00000424872 1794 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AC011816.1-201ENST00000441346 546 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms