Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 RPL9P7-201ENST00000330965 580 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC073325.2-201ENST00000339545 159 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 RNU6-600P-201ENST00000362524 99 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 RNU6-618P-201ENST00000363518 112 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 MIR607-201ENST00000385241 96 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 RPL23AP47-201ENST00000408017 460 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AL024507.1-201ENST00000412741 274 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AL512649.1-201ENST00000428997 581 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 SETP8-201ENST00000435341 628 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 BTF3P5-201ENST00000457252 467 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 MIR3690-201ENST00000580266 75 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC009303.3-201ENST00000591103 736 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC090425.2-201ENST00000608818 501 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC100793.4-201ENST00000613683 429 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 AC010733.2-201ENST00000589496 5702 ntBASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC112Q8NEF3 API5P2-201ENST00000397055 1498 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 OR6K3-202ENST00000368146 996 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 SNORD15B-201ENST00000384714 146 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 BX323014.1-201ENST00000412876 237 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC005300.1-201ENST00000428401 373 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC023347.2-201ENST00000433994 462 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 MTCO3P17-201ENST00000443775 513 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 RPL31P20-201ENST00000449593 360 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 ARPC3P2-201ENST00000457786 533 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC146507.1-201ENST00000468335 354 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC012181.1-201ENST00000479895 423 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 SNORA31.26-201ENST00000517250 137 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 ELOCP31-201ENST00000540463 467 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 MIR5680-201ENST00000577577 84 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 PCNAP1-202ENST00000595299 752 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 PRELID3BP8-201ENST00000604148 295 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 MIR8057-201ENST00000620957 69 ntBASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC112Q8NEF3 AC009487.2-201ENST00000420969 6821 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 FAM35BP-202ENST00000497389 3337 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 GNG5P1-201ENST00000255500 204 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 CKS1BP5-201ENST00000434172 273 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 HSPE1P28-201ENST00000443139 211 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 RPL29P29-201ENST00000448725 423 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 RPS4XP13-201ENST00000483219 789 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 DYNLL1P6-201ENST00000503440 264 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC093755.1-201ENST00000512950 1023 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 RN7SKP282-201ENST00000516824 299 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC104986.1-201ENST00000517978 436 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AP000857.1-201ENST00000532151 543 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 OR8L1P-201ENST00000534005 955 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC012493.2-201ENST00000595083 291 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AL606834.2-201ENST00000602954 668 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 YPEL5P2-201ENST00000605553 359 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC105227.2-201ENST00000615075 605 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 AC243756.2-201ENST00000618406 463 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 MIR622-201ENST00000638396 96 ntBASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC112Q8NEF3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 SNORA7.4-201ENST00000384249 137 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms