Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 DHX40P1-201ENST00000588725 1412 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ZNF734P-201ENST00000419494 1534 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC005294.1-201ENST00000355509 281 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RNA5SP326-201ENST00000363209 110 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RNA5SP242-201ENST00000364171 118 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 MIR558-201ENST00000384920 94 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ENSAP1-201ENST00000392855 326 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AL133482.1-201ENST00000415988 498 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 BMS1P17-202ENST00000416720 316 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RPL12P34-201ENST00000424532 479 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 MTND6P18-201ENST00000439477 513 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RPL21P89-201ENST00000444021 467 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 MRPL50P4-201ENST00000446432 475 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC073415.1-201ENST00000449240 153 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 CBX1P2-201ENST00000453841 458 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 HMGB1P21-201ENST00000502313 581 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ENPP7P11-201ENST00000505915 627 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RNU2-10P-201ENST00000516375 211 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 SCARNA15.1-201ENST00000516384 125 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC137627.1-201ENST00000545761 289 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC022404.1-201ENST00000555320 273 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC127381.1-201ENST00000555979 939 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 MIR4716-201ENST00000579628 84 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 FO393422.1-201ENST00000603908 708 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 RNA5SP440-201ENST00000612665 119 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 MIR6729-201ENST00000618194 65 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC002550.2-201ENST00000621246 394 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AL160413.1-201ENST00000622780 310 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC090617.10-201ENST00000624308 134 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 AC008079.2-201ENST00000623543 20396 ntBASIC5.5□□□□□ -1.53
PHC3Q8NDX5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
PHC3Q8NDX5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 NXPH1-205ENST00000602349 1953 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 IQCB2P-201ENST00000401788 1633 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AC092681.1-201ENST00000297369 291 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 HSPE1P11-201ENST00000339579 310 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RNA5SP435-201ENST00000364044 108 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RN7SKP6-201ENST00000364795 319 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RNU6-39P-201ENST00000384344 107 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 MIR551A-201ENST00000385042 96 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 MIR454-201ENST00000390180 115 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 U3.29-201ENST00000391296 212 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 TXNP7-201ENST00000406296 293 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RN7SKP140-201ENST00000411196 284 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AL353678.1-201ENST00000422735 741 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 MED13P1-201ENST00000428342 171 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 EIF4A1P11-201ENST00000451239 222 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AC023141.9-201ENST00000458734 412 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RN7SL174P-201ENST00000475578 289 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RN7SL717P-201ENST00000478343 297 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AC026427.2-201ENST00000506228 536 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AC103851.1-201ENST00000506833 274 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AC016559.2-201ENST00000510759 359 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RNU4-29P-201ENST00000515943 174 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 RNU7-51P-201ENST00000516560 62 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AF186190.1-201ENST00000517470 480 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AP000857.1-201ENST00000532151 543 ntBASIC5.49□□□□□ -1.53
PHC3Q8NDX5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.49□□□□□ -1.53
PHC3Q8NDX5 AL355375.2-201ENST00000574825 175 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms