Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RPL37P1-201ENST00000432310 284 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC010881.1-201ENST00000433830 235 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 CEACAMP1-201ENST00000434624 1035 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 UBE2FP3-201ENST00000436366 524 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU6-488P-201ENST00000515918 99 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU6-405P-201ENST00000516637 110 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RN7SKP92-201ENST00000517266 244 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 IGLVIV-65-201ENST00000517313 360 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC087276.1-201ENST00000529659 480 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AL109766.1-201ENST00000555080 552 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 EIF1P4-201ENST00000572664 335 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU6-88P-201ENST00000606801 100 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC087241.4-201ENST00000612441 480 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC018816.2-201ENST00000621460 353 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 MIR6730-201ENST00000622213 67 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC231657.1-201ENST00000624313 397 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 MFSD8-216ENST00000641147 4009 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC025031.4-201ENST00000621248 3271 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 ZNF37BP-203ENST00000452306 1352 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 RNU6-723P-201ENST00000383973 107 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 MIR3074-201ENST00000384885 81 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 MIR129-1-201ENST00000384972 72 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 RAD23BP2-201ENST00000416003 1207 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AL590139.1-201ENST00000416267 400 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 RBMY1KP-201ENST00000423480 476 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 NIPA2P1-201ENST00000426223 976 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AL365184.2-201ENST00000431139 435 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 BMS1P19-201ENST00000433925 393 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 MTND1P4-201ENST00000435196 415 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 RPL12P46-201ENST00000436610 195 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 RPL23AP52-201ENST00000439311 478 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 RPL26P28-201ENST00000451325 435 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 DNAJC19P1-201ENST00000455312 319 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 PPIAP21-201ENST00000464473 501 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC104164.2-201ENST00000496953 495 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 ARL2BPP4-201ENST00000506854 471 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC111000.3-201ENST00000508057 576 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 KRT19P6-201ENST00000510983 209 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC116347.2-201ENST00000514912 523 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AP003392.2-201ENST00000527269 208 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC006064.5-201ENST00000541782 248 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC090502.2-201ENST00000549267 280 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms