Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.55□□□□□ -1.36
SCUBE3Q8IX30 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SCUBE3Q8IX30 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCUBE3Q8IX30 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCUBE3Q8IX30 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 SNORA51.1-201ENST00000363243 140 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RNU6-1203P-201ENST00000410703 110 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RPL23AP31-201ENST00000456160 467 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 Y_RNA.644-201ENST00000459006 113 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AL136126.1-201ENST00000473603 402 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 SNORA31.6-201ENST00000516241 130 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 Y_RNA.674-201ENST00000516362 113 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RNA5SP400-201ENST00000517155 111 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AC012339.2-201ENST00000523996 453 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AL133271.1-201ENST00000538229 291 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 NPIPB1P-202ENST00000588786 828 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RPS29P30-201ENST00000600975 111 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AL451044.1-201ENST00000604867 238 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AL359547.2-201ENST00000615810 418 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AC073488.6-201ENST00000632293 754 ntBASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SCUBE3Q8IX30 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 XIAPP3-201ENST00000312918 795 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 SNORA43.1-201ENST00000364863 140 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 Y_RNA.352-201ENST00000365439 102 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 LCN1P2-201ENST00000372030 223 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 RNU6-611P-201ENST00000384276 104 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 RPL21P38-201ENST00000418090 167 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 RPL7AP14-201ENST00000424041 802 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 BX276092.3-201ENST00000424182 230 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC093106.2-201ENST00000428212 385 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 RPSAP65-201ENST00000429660 595 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AL445928.1-201ENST00000435545 222 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 ATP5LP2-201ENST00000440646 311 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AP001086.1-201ENST00000494882 321 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC092436.3-201ENST00000511788 257 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC025423.5-201ENST00000550230 219 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC011445.2-201ENST00000599274 173 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AL390123.1-201ENST00000603216 237 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 FAM27E4-201ENST00000605259 342 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC004832.4-201ENST00000608952 331 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 AC091953.5-201ENST00000622919 233 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 CR392039.4-201ENST00000624968 501 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 EIF2AP4-201ENST00000424793 1781 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 SNX18P3-202ENST00000565670 1750 ntBASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCUBE3Q8IX30 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms