Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC018809.2-201ENST00000602436 3823 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC104964.3-201ENST00000606115 2860 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC125336.1-201ENST00000508893 2827 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 DDX18P4-201ENST00000511690 1966 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 MIR323A-201ENST00000362199 86 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RNU6-984P-201ENST00000363236 109 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RNA5SP131-201ENST00000365452 119 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RNU6-39P-201ENST00000384344 107 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AL009179.1-201ENST00000406085 265 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RNU2-36P-201ENST00000410361 191 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RPL36AP36-201ENST00000418616 301 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC092832.1-201ENST00000422934 400 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 CYCSP51-201ENST00000443545 318 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC008571.1-201ENST00000467232 300 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC092451.1-201ENST00000480211 153 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC011005.3-201ENST00000491624 395 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 GZMAP1-201ENST00000503054 631 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 HIGD1AP14-201ENST00000507617 282 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC097473.1-201ENST00000508142 408 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 HMGN1P9-201ENST00000515212 298 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RNU6-408P-201ENST00000515910 100 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RNU6-202P-201ENST00000515998 96 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 RNU6-615P-201ENST00000516065 106 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 HSPE1P3-201ENST00000559254 309 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AL139124.1-201ENST00000609123 421 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC011890.2-201ENST00000613393 294 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC098657.3-201ENST00000620434 263 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 PLCE1P1-201ENST00000622094 305 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 U6.101-201ENST00000637707 76 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC007938.2-201ENST00000604666 2634 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 LINC01963-201ENST00000562038 3148 ntBASIC5.08□□□□□ -1.6
ATG4DQ86TL0 AC112255.1-201ENST00000624070 2493 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AP005432.1-201ENST00000580891 3485 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 Y_RNA.80-201ENST00000362996 102 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AL031679.1-201ENST00000400616 525 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AL109755.1-201ENST00000401791 649 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC233981.1-201ENST00000423224 461 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 RAC1P6-201ENST00000423911 575 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC020550.1-201ENST00000447385 163 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC002553.2-201ENST00000453217 340 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 HMGB1P15-201ENST00000453854 435 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AZGP1P2-201ENST00000454506 345 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 RNU7-27P-201ENST00000459281 62 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC026410.2-201ENST00000460281 156 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 RN7SL188P-201ENST00000469842 285 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC109481.1-201ENST00000509173 282 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 CYCSP22-201ENST00000517555 339 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC109635.4-202ENST00000531666 412 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AP000857.1-201ENST00000532151 543 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 OR8R1P-201ENST00000543943 764 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms