Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 HSPE1P11-201ENST00000339579 310 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 MIR323A-201ENST00000362199 86 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 Y_RNA.14-201ENST00000362415 103 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 Y_RNA.180-201ENST00000363867 113 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 RNU6-746P-201ENST00000384112 109 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AL360182.1-201ENST00000397433 468 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 GSTM3P2-201ENST00000412746 530 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC016769.2-201ENST00000414815 475 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 ATG3P1-201ENST00000419507 911 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 RPL12P12-201ENST00000424633 501 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC011816.1-201ENST00000441346 546 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 FRG2FP-204ENST00000453982 852 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 MTND4LP30-201ENST00000454092 297 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 RNU7-27P-201ENST00000459281 62 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC004801.2-202ENST00000463559 283 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC103987.1-201ENST00000473394 348 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 FO393415.2-201ENST00000480085 343 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC012123.2-201ENST00000485809 248 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC018797.3-201ENST00000513388 1241 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 SNORD46.2-201ENST00000516021 102 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 RNU6-1016P-201ENST00000516689 94 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 RNU4-77P-201ENST00000516692 156 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC022080.3-201ENST00000544433 482 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC018552.3-201ENST00000567416 561 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AC092747.3-201ENST00000603769 301 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 THAP12P5-201ENST00000405864 2275 ntBASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
FOXR1Q6PIV2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 Y_RNA.26-201ENST00000362539 101 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 SNORD3E-201ENST00000362899 217 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 RNU6-490P-201ENST00000362985 107 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 SNORA70.6-201ENST00000383934 134 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 MIR558-201ENST00000384920 94 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 GPS2P1-201ENST00000411761 986 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 RPS17P8-201ENST00000434525 335 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 SNRPFP3-201ENST00000457792 225 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC124945.1-201ENST00000485133 188 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 PPIAP19-201ENST00000486414 492 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC008526.1-201ENST00000509149 338 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 HIGD1AP13-201ENST00000509878 289 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC090958.1-201ENST00000511122 351 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC114781.3-201ENST00000512083 142 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 RNU6-182P-201ENST00000516970 105 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 SNORD116.3-201ENST00000517176 78 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 RNU6-111P-201ENST00000517179 105 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC078899.1-201ENST00000521432 1185 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC008555.7-201ENST00000605008 583 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AL008729.2-201ENST00000606393 473 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AL022394.1-201ENST00000606979 292 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AL138726.1-201ENST00000614873 333 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 PISRT1.1-201ENST00000616930 107 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AL512652.1-201ENST00000619006 500 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms