Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 GPR143P-201ENST00000434155 205 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 CYCSP6-201ENST00000434498 302 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 HMGB3P10-201ENST00000434734 572 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RPS3AP54-201ENST00000435535 734 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC006466.1-201ENST00000438721 289 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 MTND6P5-201ENST00000448266 512 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 PRPF38AP1-201ENST00000451976 933 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 HIGD1AP8-201ENST00000453927 274 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 RPL37P3-201ENST00000456825 293 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RANP9-201ENST00000519957 271 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC022616.3-201ENST00000523940 148 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 AP000676.2-201ENST00000529711 301 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC023442.1-201ENST00000531247 422 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC123904.2-201ENST00000548059 300 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC090502.2-201ENST00000549267 280 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC005357.1-201ENST00000588399 301 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC083806.3-201ENST00000614016 455 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AL731566.2-201ENST00000618971 317 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 U2.22-201ENST00000636441 106 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AC112255.1-201ENST00000624070 2493 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 RNA5SP335-201ENST00000363817 110 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 OR52E6-202ENST00000379946 954 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 RNU4-26P-201ENST00000410270 107 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 CBX1P3-201ENST00000413296 527 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AC007283.2-201ENST00000424739 197 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 AL353777.1-201ENST00000425552 326 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 RPS7P5-201ENST00000441482 581 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 RPS18P6-201ENST00000476880 458 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 AC083904.1-201ENST00000487828 231 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 PGAM1P13-201ENST00000507497 754 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 Y_RNA.682-201ENST00000516457 100 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 AP003072.2-201ENST00000527756 676 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AP002373.2-201ENST00000541631 1060 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 AC008083.2-201ENST00000546707 476 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 MIR3691-201ENST00000578066 90 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 MIR3118-1-201ENST00000581787 76 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RNF43Q68DV7 HSPA8P14-201ENST00000552265 1805 ntBASIC5.67□□□□□ -1.5
RNF43Q68DV7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF43Q68DV7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF43Q68DV7 ZNF519P1-201ENST00000449011 1626 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC105074.1-201ENST00000623380 3095 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 ADAM5-202ENST00000399789 1942 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms