Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC38Q502W7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC38Q502W7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC38Q502W7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC38Q502W7 RNA5SP258-201ENST00000362750 119 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 RNU6-433P-201ENST00000363216 104 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 CYB5AP4-201ENST00000396692 399 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AL583834.1-201ENST00000406943 343 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 MIR1911-201ENST00000410783 80 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 FAR2P4-202ENST00000425399 584 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AL732292.1-201ENST00000426692 226 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 AL359265.2-201ENST00000434367 631 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 UBE2V1P3-201ENST00000439651 417 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 Z95327.1-201ENST00000446082 482 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 ARL2BPP10-201ENST00000446487 531 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AC002381.1-201ENST00000447049 280 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AC073264.2-201ENST00000448886 166 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 PAXBP1P1-201ENST00000449315 447 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 MTCO3P16-201ENST00000454456 754 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 RN7SL738P-201ENST00000470264 297 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 RPL5P23-201ENST00000496040 868 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AC006390.1-201ENST00000508068 283 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AC093809.1-201ENST00000509155 340 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 IGKV1-32-201ENST00000519290 311 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 MTCO1P47-201ENST00000523889 1271 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 RFPL1S-203ENST00000539579 330 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 MIR4330-201ENST00000579077 105 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 DUXAP11-201ENST00000603858 526 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AC090186.1-201ENST00000605991 572 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 AL596245.1-201ENST00000618994 362 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 MIR7703-201ENST00000620784 77 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 AC019278.1-201ENST00000623516 479 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 PCMTD1P7-201ENST00000634506 357 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 FAM35DP-201ENST00000323387 2712 ntBASIC4.48□□□□□ -1.69
CCDC38Q502W7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC38Q502W7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC38Q502W7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC38Q502W7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC38Q502W7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC38Q502W7 RNU6-500P-201ENST00000362349 107 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 RNU6-553P-201ENST00000364047 96 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 RNA5SP239-201ENST00000410218 129 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 RPL26P29-201ENST00000415623 438 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC127526.1-201ENST00000417526 366 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 UQCRBP1-201ENST00000421129 336 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL445567.1-201ENST00000439121 144 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 MTCO1P27-201ENST00000448269 226 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 OR6C5P-201ENST00000452388 923 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 HMGB1P15-201ENST00000453854 435 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 RPL21P126-201ENST00000470049 478 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC104563.1-201ENST00000476147 376 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 BET1P1-201ENST00000482276 359 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 COX7A2P2-201ENST00000505291 250 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC111000.2-201ENST00000507775 550 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC109446.2-201ENST00000567872 497 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC135628.1-201ENST00000568867 534 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC090615.1-201ENST00000577519 154 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC069061.3-201ENST00000582254 823 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC244505.7-201ENST00000599675 272 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AL109653.1-201ENST00000603091 248 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC010738.1-201ENST00000604970 987 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC055876.5-201ENST00000605667 259 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC012603.1-201ENST00000606424 528 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 MIR6891-201ENST00000618788 93 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC012618.3-205ENST00000637896 1496 ntBASIC4.47□□□□□ -1.69
CCDC38Q502W7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC38Q502W7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms