Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AL391156.1-201ENST00000554965 554 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC009101.1-201ENST00000568135 242 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 MIR4644-201ENST00000579929 84 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 AL133370.2-201ENST00000619934 439 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC009313.2-201ENST00000417893 1941 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CACNA1SQ13698 SNORD62.1-201ENST00000362541 86 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 AL139415.2-201ENST00000431968 163 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 AP004217.1-201ENST00000480579 346 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.34□□□□□ -1.87
CACNA1SQ13698 MTCO1P14-201ENST00000441695 1559 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CACNA1SQ13698 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.34□□□□□ -1.87
CACNA1SQ13698 MIR592-201ENST00000384959 97 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 MIR764-201ENST00000390811 85 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.34□□□□□ -1.87
CACNA1SQ13698 AC245517.2-201ENST00000442890 346 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.34□□□□□ -1.87
CACNA1SQ13698 RPL23AP23-201ENST00000452590 471 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 TXNP6-201ENST00000510190 310 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 FAM60DP-201ENST00000524174 632 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 MIR4716-201ENST00000579628 84 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 AP005212.4-201ENST00000614206 710 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 AP006248.2-201ENST00000623309 592 ntBASIC3.34□□□□□ -1.87
CACNA1SQ13698 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.34□□□□□ -1.87
CACNA1SQ13698 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
CACNA1SQ13698 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 RPS4XP7-201ENST00000406274 780 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 VN1R31P-201ENST00000417498 730 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 RNA5SP282-201ENST00000516355 108 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 NPM1P52-201ENST00000518264 846 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC022960.2-201ENST00000616300 666 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1SQ13698 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1SQ13698 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1SQ13698 EXOC5P1-201ENST00000510543 1969 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1SQ13698 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1SQ13698 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1SQ13698 YPEL5P1-201ENST00000419731 367 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 HMGB3P21-201ENST00000452483 547 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 RNU7-170P-201ENST00000459303 61 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC021146.5-201ENST00000503544 545 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 NDUFB4P9-201ENST00000511646 388 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 OR8X1P-201ENST00000534542 869 ntBASIC3.33□□□□□ -1.88
CACNA1SQ13698 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.33□□□□□ -1.88
CACNA1SQ13698 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1SQ13698 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1SQ13698 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.32□□□□□ -1.88
CACNA1SQ13698 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.32□□□□□ -1.88
CACNA1SQ13698 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1SQ13698 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1SQ13698 EXTL2P1-201ENST00000446218 416 ntBASIC3.32□□□□□ -1.88
CACNA1SQ13698 UBL5P3-201ENST00000475112 231 ntBASIC3.32□□□□□ -1.88
CACNA1SQ13698 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1SQ13698 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.32□□□□□ -1.88
CACNA1SQ13698 CBX3P5-201ENST00000552017 521 ntBASIC3.32□□□□□ -1.88
CACNA1SQ13698 AL442163.2-201ENST00000553912 710 ntBASIC3.32□□□□□ -1.88
CACNA1SQ13698 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1SQ13698 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
CACNA1SQ13698 CFTRP2-201ENST00000634304 199 ntBASIC3.32□□□□□ -1.88
CACNA1SQ13698 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1SQ13698 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC090229.1-201ENST00000590983 1609 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1SQ13698 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1SQ13698 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1SQ13698 MIR504-201ENST00000385065 83 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CACNA1SQ13698 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.31□□□□□ -1.88
CACNA1SQ13698 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.31□□□□□ -1.88
CACNA1SQ13698 AL513043.1-201ENST00000439124 535 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC087385.1-201ENST00000475062 312 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms