Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL39P62891 RSL24D1P3-201ENST00000449255 495 ntBASIC1.67□□□□□ -2.14
RPL39P62891 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL39P62891 AC073901.1-201ENST00000462471 408 ntBASIC1.67□□□□□ -2.14
RPL39P62891 FTH1P2-201ENST00000466086 412 ntBASIC1.67□□□□□ -2.14
RPL39P62891 LINC00888-204ENST00000487386 421 ntBASIC1.67□□□□□ -2.14
RPL39P62891 VN1R104P-201ENST00000505115 1009 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL39P62891 TTC39CP1-201ENST00000512513 755 ntBASIC1.67□□□□□ -2.14
RPL39P62891 HIGD1AP18-201ENST00000520730 278 ntBASIC1.67□□□□□ -2.14
RPL39P62891 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL39P62891 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL39P62891 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.67□□□□□ -2.14
RPL39P62891 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RPL39P62891 CKS1BP1-201ENST00000555221 240 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL39P62891 AC007619.2-201ENST00000605743 379 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AC067747.1-201ENST00000608026 250 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AL160394.1-201ENST00000624765 724 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AC012321.1-201ENST00000561622 1588 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AC010329.2-201ENST00000595195 2737 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AC244517.1-201ENST00000606030 2086 ntBASIC1.67□□□□□ -2.14
RPL39P62891 AL122126.1-201ENST00000546905 1318 ntBASIC1.66□□□□□ -2.14
RPL39P62891 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
RPL39P62891 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPL39P62891 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.66□□□□□ -2.14
RPL39P62891 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RPL39P62891 RNU6-859P-201ENST00000362728 107 ntBASIC1.66□□□□□ -2.14
RPL39P62891 OR5H15-201ENST00000383696 930 ntBASIC1.66□□□□□ -2.14
RPL39P62891 SNORA44-201ENST00000384584 132 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AL360182.1-201ENST00000397433 468 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AL139039.1-201ENST00000401900 692 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RNA5SP492-201ENST00000411330 114 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL39P62891 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL39P62891 AC073508.1-201ENST00000428866 656 ntBASIC1.66□□□□□ -2.14
RPL39P62891 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.66□□□□□ -2.14
RPL39P62891 AL353597.2-202ENST00000434901 373 ntBASIC1.66□□□□□ -2.14
RPL39P62891 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL39P62891 NANOGNBP1-201ENST00000448444 480 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RPL23AP15-201ENST00000450202 459 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RPL21P8-201ENST00000465083 535 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RPS27AP1-201ENST00000475545 471 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RPS4XP6-201ENST00000477670 797 ntBASIC1.66□□□□□ -2.14
RPL39P62891 GTF2IP9-201ENST00000502460 301 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RFPL4AP3-201ENST00000515267 345 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RN7SKP24-201ENST00000515888 284 ntBASIC1.66□□□□□ -2.14
RPL39P62891 RNA5SP367-201ENST00000516557 118 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AP000889.2-201ENST00000532684 490 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AC090695.1-201ENST00000561269 1222 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL39P62891 AC010620.2-201ENST00000600135 313 ntBASIC1.66□□□□□ -2.14
RPL39P62891 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPL39P62891 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL39P62891 AC011890.2-201ENST00000613393 294 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL39P62891 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL39P62891 AL731566.2-201ENST00000618971 317 ntBASIC1.66□□□□□ -2.14
RPL39P62891 U4.3-201ENST00000621047 82 ntBASIC1.66□□□□□ -2.14
RPL39P62891 AC020763.5-201ENST00000623298 430 ntBASIC1.66□□□□□ -2.14
RPL39P62891 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.66□□□□□ -2.14
RPL39P62891 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPL39P62891 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RPL39P62891 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
RPL39P62891 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
RPL39P62891 RNU1-109P-201ENST00000383960 147 ntBASIC1.65□□□□□ -2.15
RPL39P62891 MIR27B-201ENST00000385129 97 ntBASIC1.65□□□□□ -2.15
RPL39P62891 AJ239321.1-201ENST00000424255 564 ntBASIC1.65□□□□□ -2.15
RPL39P62891 ARL5AP4-201ENST00000430731 512 ntBASIC1.65□□□□□ -2.15
RPL39P62891 FCF1P1-201ENST00000432690 571 ntBASIC1.65□□□□□ -2.15
RPL39P62891 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.65□□□□□ -2.15
RPL39P62891 AC105272.1-201ENST00000438604 198 ntBASIC1.65□□□□□ -2.15
RPL39P62891 AL353093.1-201ENST00000441292 436 ntBASIC1.65□□□□□ -2.15
RPL39P62891 AC239367.2-201ENST00000447309 705 ntBASIC1.65□□□□□ -2.15
RPL39P62891 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC1.65□□□□□ -2.15
RPL39P62891 ARPC3P2-201ENST00000457786 533 ntBASIC1.65□□□□□ -2.15
RPL39P62891 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.65□□□□□ -2.15
RPL39P62891 RPL31P13-201ENST00000484151 370 ntBASIC1.65□□□□□ -2.15
RPL39P62891 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RPL39P62891 XKRY-201ENST00000510392 1100 ntBASIC1.65□□□□□ -2.15
RPL39P62891 AC034159.1-201ENST00000513885 583 ntBASIC1.65□□□□□ -2.15
RPL39P62891 RNA5SP320-201ENST00000516263 124 ntBASIC1.65□□□□□ -2.15
RPL39P62891 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.65□□□□□ -2.15
RPL39P62891 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RPL39P62891 HSPE1P20-201ENST00000538133 289 ntBASIC1.65□□□□□ -2.15
RPL39P62891 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.65□□□□□ -2.15
RPL39P62891 MIR4325-201ENST00000583049 90 ntBASIC1.65□□□□□ -2.15
RPL39P62891 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.65□□□□□ -2.15
RPL39P62891 AL159169.3-201ENST00000608871 561 ntBASIC1.65□□□□□ -2.15
RPL39P62891 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.65□□□□□ -2.15
RPL39P62891 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RPL39P62891 AC097714.1-201ENST00000511272 1647 ntBASIC1.65□□□□□ -2.15
RPL39P62891 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.65□□□□□ -2.15
RPL39P62891 CKAP2P1-201ENST00000555477 2049 ntBASIC1.64□□□□□ -2.15
RPL39P62891 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.64□□□□□ -2.15
RPL39P62891 MIR670-201ENST00000390142 98 ntBASIC1.64□□□□□ -2.15
RPL39P62891 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RPL39P62891 AL389915.1-201ENST00000422463 466 ntBASIC1.64□□□□□ -2.15
RPL39P62891 WARS2P1-201ENST00000429678 537 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms