Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 RNU6-441P-201ENST00000384545 106 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AL445189.1-201ENST00000405722 338 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 JKAMPP1-201ENST00000413804 919 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.29□□□□□ -1.72
HDAC4P56524 COX6CP15-201ENST00000426313 211 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC096632.1-201ENST00000427395 310 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC017083.1-201ENST00000428093 483 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.29□□□□□ -1.72
HDAC4P56524 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC4P56524 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC4P56524 AL109741.2-201ENST00000455561 343 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC010618.1-201ENST00000469924 477 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
HDAC4P56524 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.29□□□□□ -1.72
HDAC4P56524 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC4P56524 AC017037.1-201ENST00000508460 471 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC4P56524 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.29□□□□□ -1.72
HDAC4P56524 AC141257.3-201ENST00000572906 215 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC4P56524 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC4P56524 AP005136.1-201ENST00000579765 429 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC4P56524 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC4P56524 VN1R85P-201ENST00000601587 426 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC007566.2-201ENST00000603642 413 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC106791.2-201ENST00000604680 391 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 AC006065.5-201ENST00000623427 349 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.29□□□□□ -1.72
HDAC4P56524 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 AC018555.1-201ENST00000567548 1980 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HDAC4P56524 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC4P56524 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HDAC4P56524 MTND4P34-201ENST00000572715 1371 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC4P56524 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC4P56524 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HDAC4P56524 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC4P56524 RNA5SP515-201ENST00000364570 118 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 MIR506-201ENST00000384998 124 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AL450338.1-201ENST00000407987 512 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 PGBD4P8-201ENST00000412993 562 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AL358472.1-201ENST00000431295 329 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 CKS1BP5-201ENST00000434172 273 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC4P56524 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC4P56524 MTCO1P48-201ENST00000448024 1096 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC4P56524 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC4P56524 ANP32BP2-201ENST00000454525 545 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 RNU7-125P-201ENST00000458760 62 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AC146507.1-201ENST00000468335 354 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AC013828.1-201ENST00000481845 158 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AC147055.4-201ENST00000504399 745 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.28□□□□□ -1.72
HDAC4P56524 AC105313.1-201ENST00000509121 353 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 NDUFB4P9-201ENST00000511646 388 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 RNU7-143P-201ENST00000516781 65 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 MIR2116-201ENST00000517221 80 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC4P56524 SLC2A13P1-201ENST00000531560 322 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AL356057.1-201ENST00000533798 831 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 ELOCP32-201ENST00000548625 324 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC4P56524 SULT1C2P1-202ENST00000562418 459 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC4P56524 AC002400.1-201ENST00000569310 726 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 RPL23AP87-202ENST00000573039 466 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC4P56524 AC110760.3-201ENST00000598794 467 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 Z99497.2-201ENST00000603634 310 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AL358072.1-201ENST00000604156 575 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AL592221.1-201ENST00000605266 382 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 AC080013.6-201ENST00000606185 215 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HDAC4P56524 AC023043.4-201ENST00000612081 449 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.28□□□□□ -1.72
HDAC4P56524 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC4P56524 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC4P56524 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC4P56524 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC4P56524 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC4P56524 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC4P56524 DCAF13P1-201ENST00000495256 1330 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC4P56524 RNU6-931P-201ENST00000363850 107 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 RNU6-1200P-201ENST00000384162 107 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 MIR649-201ENST00000384843 97 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 RNU11-4P-201ENST00000391149 133 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 SSXP10-201ENST00000402595 565 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 RNU2-28P-201ENST00000410457 189 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC4P56524 AC098592.1-201ENST00000419352 333 ntBASIC4.27□□□□□ -1.73
HDAC4P56524 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC4P56524 AL365338.1-201ENST00000422282 858 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms