Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH13P55290 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC083863.1-201ENST00000438811 231 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 NUTF2P3-201ENST00000448540 384 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AL500522.2-201ENST00000448562 343 ntBASIC3.83□□□□□ -1.8
CDH13P55290 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH13P55290 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 AP000873.1-201ENST00000463987 400 ntBASIC3.83□□□□□ -1.8
CDH13P55290 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH13P55290 AC090453.1-201ENST00000495560 436 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 MTCYBP17-201ENST00000503579 789 ntBASIC3.83□□□□□ -1.8
CDH13P55290 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH13P55290 BTF3L4P4-201ENST00000506381 449 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC021146.8-201ENST00000507455 733 ntBASIC3.83□□□□□ -1.8
CDH13P55290 PRELID3BP5-201ENST00000508612 460 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC112673.1-201ENST00000513168 575 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC006499.2-201ENST00000513470 337 ntBASIC3.83□□□□□ -1.8
CDH13P55290 RNY4P37-201ENST00000516225 96 ntBASIC3.83□□□□□ -1.8
CDH13P55290 Y_RNA.717-201ENST00000517106 92 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH13P55290 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH13P55290 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH13P55290 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH13P55290 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH13P55290 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH13P55290 AL133457.1-201ENST00000564251 987 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AL354943.1-201ENST00000572103 781 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH13P55290 AC091167.4-201ENST00000605079 184 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 AC079395.3-201ENST00000615161 484 ntBASIC3.83□□□□□ -1.8
CDH13P55290 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AL356863.1-201ENST00000623378 1080 ntBASIC3.83□□□□□ -1.8
CDH13P55290 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 OR5BR1P-201ENST00000524992 1330 ntBASIC3.83□□□□□ -1.8
CDH13P55290 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH13P55290 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH13P55290 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDH13P55290 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDH13P55290 RNU1-32P-201ENST00000363937 159 ntBASIC3.82□□□□□ -1.8
CDH13P55290 RNA5SP130-201ENST00000364431 114 ntBASIC3.82□□□□□ -1.8
CDH13P55290 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDH13P55290 U3.29-201ENST00000391296 212 ntBASIC3.82□□□□□ -1.8
CDH13P55290 OR6C69P-201ENST00000394268 893 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH13P55290 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH13P55290 RPL7P53-201ENST00000421245 739 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH13P55290 MRPS18BP2-201ENST00000434310 759 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH13P55290 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH13P55290 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH13P55290 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH13P55290 USP9YP10-201ENST00000454868 628 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AP000926.1-201ENST00000479573 241 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AC106872.2-201ENST00000494303 480 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH13P55290 AC118282.1-201ENST00000506408 765 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AC020593.1-201ENST00000507399 299 ntBASIC3.82□□□□□ -1.8
CDH13P55290 XKRY-201ENST00000510392 1100 ntBASIC3.82□□□□□ -1.8
CDH13P55290 USP9YP5-201ENST00000511770 630 ntBASIC3.82□□□□□ -1.8
CDH13P55290 RNA5SP179-201ENST00000517284 121 ntBASIC3.82□□□□□ -1.8
CDH13P55290 NARSP2-201ENST00000518524 679 ntBASIC3.82□□□□□ -1.8
CDH13P55290 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH13P55290 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH13P55290 AC091516.1-201ENST00000549191 703 ntBASIC3.82□□□□□ -1.8
CDH13P55290 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH13P55290 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH13P55290 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH13P55290 AL158211.1-201ENST00000566763 763 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH13P55290 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 AL158042.1-201ENST00000605338 460 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AC006270.3-201ENST00000605967 1036 ntBASIC3.82□□□□□ -1.8
CDH13P55290 uc_338.32-201ENST00000615087 172 ntBASIC3.82□□□□□ -1.8
CDH13P55290 AC025588.4-201ENST00000615802 908 ntBASIC3.82□□□□□ -1.8
CDH13P55290 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 AC140725.3-201ENST00000616193 880 ntBASIC3.82□□□□□ -1.8
CDH13P55290 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms