Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NUP98P52948 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NUP98P52948 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP98P52948 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP98P52948 NPM1P11-201ENST00000417106 855 ntBASIC3.15□□□□□ -1.91
NUP98P52948 IPMKP1-201ENST00000425988 855 ntBASIC3.15□□□□□ -1.91
NUP98P52948 ST13P20-201ENST00000447996 1065 ntBASIC3.15□□□□□ -1.91
NUP98P52948 RPS20P32-201ENST00000456044 356 ntBASIC3.15□□□□□ -1.91
NUP98P52948 TRBV8-1-201ENST00000481590 279 ntBASIC3.15□□□□□ -1.91
NUP98P52948 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
NUP98P52948 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.15□□□□□ -1.91
NUP98P52948 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.15□□□□□ -1.91
NUP98P52948 AC106872.2-201ENST00000494303 480 ntBASIC3.15□□□□□ -1.91
NUP98P52948 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.15□□□□□ -1.91
NUP98P52948 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP98P52948 AC009159.1-201ENST00000618386 642 ntBASIC3.15□□□□□ -1.91
NUP98P52948 MIR6715B-201ENST00000637172 77 ntBASIC3.15□□□□□ -1.91
NUP98P52948 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP98P52948 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
NUP98P52948 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP98P52948 U8.2-201ENST00000363156 134 ntBASIC3.14□□□□□ -1.91
NUP98P52948 RNU6-984P-201ENST00000363236 109 ntBASIC3.14□□□□□ -1.91
NUP98P52948 RNU1-100P-201ENST00000365255 165 ntBASIC3.14□□□□□ -1.91
NUP98P52948 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NUP98P52948 AC022022.1-201ENST00000430304 178 ntBASIC3.14□□□□□ -1.91
NUP98P52948 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
NUP98P52948 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP98P52948 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUP98P52948 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.14□□□□□ -1.91
NUP98P52948 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP98P52948 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP98P52948 VN1R31P-201ENST00000417498 730 ntBASIC3.14□□□□□ -1.91
NUP98P52948 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP98P52948 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP98P52948 ELOCP10-201ENST00000440624 327 ntBASIC3.14□□□□□ -1.91
NUP98P52948 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP98P52948 AC022431.1-201ENST00000450941 438 ntBASIC3.14□□□□□ -1.91
NUP98P52948 MRPL35P4-201ENST00000453682 566 ntBASIC3.14□□□□□ -1.91
NUP98P52948 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.14□□□□□ -1.91
NUP98P52948 AC128657.1-201ENST00000549459 145 ntBASIC3.14□□□□□ -1.91
NUP98P52948 AC022069.1-201ENST00000582910 658 ntBASIC3.14□□□□□ -1.91
NUP98P52948 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP98P52948 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP98P52948 ELOCP34-201ENST00000604436 327 ntBASIC3.14□□□□□ -1.91
NUP98P52948 AL713998.2-201ENST00000604538 1198 ntBASIC3.14□□□□□ -1.91
NUP98P52948 AC116447.1-201ENST00000613153 453 ntBASIC3.14□□□□□ -1.91
NUP98P52948 AC022960.2-201ENST00000616300 666 ntBASIC3.14□□□□□ -1.91
NUP98P52948 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP98P52948 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP98P52948 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP98P52948 AC069528.2-201ENST00000624849 1991 ntBASIC3.13□□□□□ -1.91
NUP98P52948 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP98P52948 RNA5SP210-201ENST00000391034 120 ntBASIC3.13□□□□□ -1.91
NUP98P52948 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.13□□□□□ -1.91
NUP98P52948 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.13□□□□□ -1.91
NUP98P52948 RWDD4P2-201ENST00000426392 563 ntBASIC3.13□□□□□ -1.91
NUP98P52948 AL356320.1-201ENST00000429616 163 ntBASIC3.13□□□□□ -1.91
NUP98P52948 CBX1P4-201ENST00000439415 457 ntBASIC3.13□□□□□ -1.91
NUP98P52948 snoU13.15-201ENST00000459407 104 ntBASIC3.13□□□□□ -1.91
NUP98P52948 AC078785.3-201ENST00000476607 425 ntBASIC3.13□□□□□ -1.91
NUP98P52948 RWDD4P1-201ENST00000488019 565 ntBASIC3.13□□□□□ -1.91
NUP98P52948 AC008716.1-201ENST00000511084 513 ntBASIC3.13□□□□□ -1.91
NUP98P52948 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP98P52948 VTA1P2-201ENST00000520205 911 ntBASIC3.13□□□□□ -1.91
NUP98P52948 AP000857.1-201ENST00000532151 543 ntBASIC3.13□□□□□ -1.91
NUP98P52948 AC105036.1-201ENST00000566222 271 ntBASIC3.13□□□□□ -1.91
NUP98P52948 AC009101.1-201ENST00000568135 242 ntBASIC3.13□□□□□ -1.91
NUP98P52948 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NUP98P52948 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP98P52948 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.13□□□□□ -1.91
NUP98P52948 RPL9P7-201ENST00000330965 580 ntBASIC3.12□□□□□ -1.91
NUP98P52948 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NUP98P52948 AL590290.1-201ENST00000405336 380 ntBASIC3.12□□□□□ -1.91
NUP98P52948 RNA5SP508-201ENST00000411327 119 ntBASIC3.12□□□□□ -1.91
NUP98P52948 AC126182.1-201ENST00000478134 357 ntBASIC3.12□□□□□ -1.91
NUP98P52948 AC018797.3-201ENST00000513388 1241 ntBASIC3.12□□□□□ -1.91
NUP98P52948 MTCYBP19-201ENST00000517463 1124 ntBASIC3.12□□□□□ -1.91
NUP98P52948 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NUP98P52948 AC017076.1-201ENST00000607613 578 ntBASIC3.12□□□□□ -1.91
NUP98P52948 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP98P52948 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NUP98P52948 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP98P52948 RAD1P1-201ENST00000231383 813 ntBASIC3.12□□□□□ -1.91
NUP98P52948 RNA5SP105-201ENST00000391123 113 ntBASIC3.12□□□□□ -1.91
NUP98P52948 AC099336.2-201ENST00000422457 254 ntBASIC3.12□□□□□ -1.91
NUP98P52948 TOMM20P4-201ENST00000427861 435 ntBASIC3.12□□□□□ -1.91
NUP98P52948 AL353597.2-202ENST00000434901 373 ntBASIC3.12□□□□□ -1.91
NUP98P52948 AC010095.1-201ENST00000443543 144 ntBASIC3.12□□□□□ -1.91
NUP98P52948 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
NUP98P52948 IFNWP4-201ENST00000453148 294 ntBASIC3.12□□□□□ -1.91
NUP98P52948 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP98P52948 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.12□□□□□ -1.91
NUP98P52948 SNORA31.1-201ENST00000515993 133 ntBASIC3.12□□□□□ -1.91
NUP98P52948 SNORA31.5-201ENST00000516190 133 ntBASIC3.12□□□□□ -1.91
NUP98P52948 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP98P52948 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP98P52948 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP98P52948 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP98P52948 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP98P52948 SEC63P1-201ENST00000425785 1258 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms