Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.8□□□□□ -1.48
USP11P51784 GVINP1-202ENST00000531871 7271 ntBASIC5.8□□□□□ -1.48
USP11P51784 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.8□□□□□ -1.48
USP11P51784 Y_RNA.231-201ENST00000364358 102 ntBASIC5.8□□□□□ -1.48
USP11P51784 RNU6-169P-201ENST00000365336 107 ntBASIC5.8□□□□□ -1.48
USP11P51784 SNORA2.3-201ENST00000383920 135 ntBASIC5.8□□□□□ -1.48
USP11P51784 RNU6-196P-201ENST00000384315 107 ntBASIC5.8□□□□□ -1.48
USP11P51784 SNORD116-29-201ENST00000384516 83 ntBASIC5.8□□□□□ -1.48
USP11P51784 MIR937-201ENST00000401271 86 ntBASIC5.8□□□□□ -1.48
USP11P51784 HMGB1P17-201ENST00000403495 628 ntBASIC5.8□□□□□ -1.48
USP11P51784 RNU2-39P-201ENST00000410604 198 ntBASIC5.8□□□□□ -1.48
USP11P51784 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 AC007394.1-201ENST00000421941 531 ntBASIC5.8□□□□□ -1.48
USP11P51784 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.8□□□□□ -1.48
USP11P51784 AC019097.1-201ENST00000424783 735 ntBASIC5.8□□□□□ -1.48
USP11P51784 AC104837.2-201ENST00000427236 424 ntBASIC5.8□□□□□ -1.48
USP11P51784 RPS3AP54-201ENST00000435535 734 ntBASIC5.8□□□□□ -1.48
USP11P51784 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 CEACAMP7-201ENST00000444105 496 ntBASIC5.8□□□□□ -1.48
USP11P51784 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.8□□□□□ -1.48
USP11P51784 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 PRPF38AP1-201ENST00000451976 933 ntBASIC5.8□□□□□ -1.48
USP11P51784 RPL7P15-201ENST00000461190 712 ntBASIC5.8□□□□□ -1.48
USP11P51784 MTCO2P29-201ENST00000465212 189 ntBASIC5.8□□□□□ -1.48
USP11P51784 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.8□□□□□ -1.48
USP11P51784 RPL32P9-201ENST00000487963 407 ntBASIC5.8□□□□□ -1.48
USP11P51784 RN7SL441P-201ENST00000492388 296 ntBASIC5.8□□□□□ -1.48
USP11P51784 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.8□□□□□ -1.48
USP11P51784 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
USP11P51784 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.8□□□□□ -1.48
USP11P51784 AC079075.1-201ENST00000559543 878 ntBASIC5.8□□□□□ -1.48
USP11P51784 AC044860.2-201ENST00000561005 179 ntBASIC5.8□□□□□ -1.48
USP11P51784 AC026464.5-201ENST00000562497 722 ntBASIC5.8□□□□□ -1.48
USP11P51784 MIR3118-1-201ENST00000581787 76 ntBASIC5.8□□□□□ -1.48
USP11P51784 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
USP11P51784 BX664608.1-201ENST00000610519 487 ntBASIC5.8□□□□□ -1.48
USP11P51784 AC093913.1-201ENST00000614178 329 ntBASIC5.8□□□□□ -1.48
USP11P51784 AC037198.3-201ENST00000616754 526 ntBASIC5.8□□□□□ -1.48
USP11P51784 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.8□□□□□ -1.48
USP11P51784 AC010149.2-201ENST00000637608 315 ntBASIC5.8□□□□□ -1.48
USP11P51784 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.8□□□□□ -1.48
USP11P51784 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP11P51784 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
USP11P51784 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP11P51784 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.8□□□□□ -1.48
USP11P51784 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
USP11P51784 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP11P51784 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP11P51784 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 OR4G1P-203ENST00000641984 1631 ntBASIC5.79□□□□□ -1.48
USP11P51784 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 RNU6-1309P-201ENST00000363305 108 ntBASIC5.79□□□□□ -1.48
USP11P51784 RNU6-1318P-201ENST00000365389 103 ntBASIC5.79□□□□□ -1.48
USP11P51784 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
USP11P51784 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 SNORA22B-201ENST00000383876 138 ntBASIC5.79□□□□□ -1.48
USP11P51784 RNU6-730P-201ENST00000383954 104 ntBASIC5.79□□□□□ -1.48
USP11P51784 MIR568-201ENST00000385036 95 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL078599.1-201ENST00000402075 293 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL591416.1-201ENST00000404015 867 ntBASIC5.79□□□□□ -1.48
USP11P51784 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.79□□□□□ -1.48
USP11P51784 AC078974.1-201ENST00000411597 223 ntBASIC5.79□□□□□ -1.48
USP11P51784 AC009310.1-201ENST00000414414 451 ntBASIC5.79□□□□□ -1.48
USP11P51784 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.79□□□□□ -1.48
USP11P51784 AL353777.1-201ENST00000425552 326 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.79□□□□□ -1.48
USP11P51784 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.79□□□□□ -1.48
USP11P51784 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.79□□□□□ -1.48
USP11P51784 ATP5JP1-201ENST00000431631 322 ntBASIC5.79□□□□□ -1.48
USP11P51784 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.79□□□□□ -1.48
USP11P51784 AC004980.3-201ENST00000447046 365 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.79□□□□□ -1.48
USP11P51784 MTND5P22-201ENST00000458380 195 ntBASIC5.79□□□□□ -1.48
USP11P51784 RPL23AP12-201ENST00000467573 473 ntBASIC5.79□□□□□ -1.48
USP11P51784 RPL23AP71-201ENST00000470966 469 ntBASIC5.79□□□□□ -1.48
USP11P51784 RPL31P50-201ENST00000471002 296 ntBASIC5.79□□□□□ -1.48
USP11P51784 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.79□□□□□ -1.48
USP11P51784 AL049874.2-201ENST00000492636 288 ntBASIC5.79□□□□□ -1.48
USP11P51784 RN7SL244P-201ENST00000493405 297 ntBASIC5.79□□□□□ -1.48
USP11P51784 RPS4XP18-201ENST00000495480 763 ntBASIC5.79□□□□□ -1.48
USP11P51784 RPL38P4-201ENST00000502376 214 ntBASIC5.79□□□□□ -1.48
USP11P51784 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 MTND4LP22-201ENST00000508209 276 ntBASIC5.79□□□□□ -1.48
USP11P51784 KLHL2P1-201ENST00000508691 521 ntBASIC5.79□□□□□ -1.48
USP11P51784 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.79□□□□□ -1.48
USP11P51784 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.79□□□□□ -1.48
USP11P51784 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.79□□□□□ -1.48
USP11P51784 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.79□□□□□ -1.48
USP11P51784 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.79□□□□□ -1.48
USP11P51784 COX6CP5-201ENST00000527162 228 ntBASIC5.79□□□□□ -1.48
USP11P51784 OR5BN1P-201ENST00000532955 829 ntBASIC5.79□□□□□ -1.48
USP11P51784 AC090312.1-201ENST00000580637 348 ntBASIC5.79□□□□□ -1.48
USP11P51784 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.79□□□□□ -1.48
USP11P51784 AC087763.1-201ENST00000603391 286 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms