Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.31□□□□□ -1.56
MRE11P49959 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 SEPT7P9-203ENST00000604116 343 ntBASIC5.31□□□□□ -1.56
MRE11P49959 ELOCP34-201ENST00000604436 327 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AL159169.3-201ENST00000608871 561 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AC072046.2-201ENST00000618366 268 ntBASIC5.31□□□□□ -1.56
MRE11P49959 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 ELF2P3-201ENST00000445099 1506 ntBASIC5.31□□□□□ -1.56
MRE11P49959 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MRE11P49959 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
MRE11P49959 AL136164.3-201ENST00000624429 3978 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 AL031119.1-201ENST00000404707 1879 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC046144.1-201ENST00000478559 1853 ntBASIC5.3□□□□□ -1.56
MRE11P49959 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
MRE11P49959 MAPK10-304ENST00000641341 3984 ntBASIC5.3□□□□□ -1.56
MRE11P49959 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.3□□□□□ -1.56
MRE11P49959 RNU6-433P-201ENST00000363216 104 ntBASIC5.3□□□□□ -1.56
MRE11P49959 SNORD46.1-201ENST00000364139 104 ntBASIC5.3□□□□□ -1.56
MRE11P49959 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 SUGT1P1-201ENST00000379514 476 ntBASIC5.3□□□□□ -1.56
MRE11P49959 Y_RNA.582-201ENST00000391023 95 ntBASIC5.3□□□□□ -1.56
MRE11P49959 MIR298-201ENST00000401212 88 ntBASIC5.3□□□□□ -1.56
MRE11P49959 TMSB4XP8-201ENST00000402089 135 ntBASIC5.3□□□□□ -1.56
MRE11P49959 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.3□□□□□ -1.56
MRE11P49959 RPL17P12-201ENST00000413391 526 ntBASIC5.3□□□□□ -1.56
MRE11P49959 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.3□□□□□ -1.56
MRE11P49959 TMSB4XP6-201ENST00000415187 135 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC245052.5-201ENST00000416320 649 ntBASIC5.3□□□□□ -1.56
MRE11P49959 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 TMSB4XP1-201ENST00000424567 135 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.3□□□□□ -1.56
MRE11P49959 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 AL513175.1-201ENST00000431492 780 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.3□□□□□ -1.56
MRE11P49959 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.3□□□□□ -1.56
MRE11P49959 OR7E125P-201ENST00000443450 846 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.3□□□□□ -1.56
MRE11P49959 PAXBP1P1-201ENST00000449315 447 ntBASIC5.3□□□□□ -1.56
MRE11P49959 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.3□□□□□ -1.56
MRE11P49959 AC079804.1-201ENST00000461922 436 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.3□□□□□ -1.56
MRE11P49959 AC013356.1-201ENST00000489027 564 ntBASIC5.3□□□□□ -1.56
MRE11P49959 UBA52P3-201ENST00000491303 382 ntBASIC5.3□□□□□ -1.56
MRE11P49959 FCF1P3-201ENST00000496394 590 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC108078.3-201ENST00000502633 489 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.3□□□□□ -1.56
MRE11P49959 RNU6-528P-201ENST00000516926 100 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.3□□□□□ -1.56
MRE11P49959 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.3□□□□□ -1.56
MRE11P49959 AC068714.1-201ENST00000559623 800 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC090312.2-201ENST00000582687 378 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC105254.2-201ENST00000603636 436 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AL022154.1-201ENST00000604698 785 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AL121932.1-201ENST00000605542 214 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC107214.2-201ENST00000608204 634 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC092650.2-201ENST00000619984 902 ntBASIC5.3□□□□□ -1.56
MRE11P49959 MIR6075-201ENST00000620782 95 ntBASIC5.3□□□□□ -1.56
MRE11P49959 AC018816.2-201ENST00000621460 353 ntBASIC5.3□□□□□ -1.56
MRE11P49959 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.3□□□□□ -1.56
MRE11P49959 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.3□□□□□ -1.56
MRE11P49959 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.3□□□□□ -1.56
MRE11P49959 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MRE11P49959 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.29□□□□□ -1.56
MRE11P49959 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.29□□□□□ -1.56
MRE11P49959 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.29□□□□□ -1.56
MRE11P49959 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.29□□□□□ -1.56
MRE11P49959 CDR1-202ENST00000625883 1485 ntBASIC5.29□□□□□ -1.56
MRE11P49959 RNU6-582P-201ENST00000362989 107 ntBASIC5.29□□□□□ -1.56
MRE11P49959 RN7SKP226-201ENST00000364912 300 ntBASIC5.29□□□□□ -1.56
MRE11P49959 EIF4A1P3-201ENST00000411521 244 ntBASIC5.29□□□□□ -1.56
MRE11P49959 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.29□□□□□ -1.56
MRE11P49959 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 RPL12P46-201ENST00000436610 195 ntBASIC5.29□□□□□ -1.56
MRE11P49959 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.29□□□□□ -1.56
MRE11P49959 AC010326.1-201ENST00000462726 602 ntBASIC5.29□□□□□ -1.56
MRE11P49959 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
MRE11P49959 AC109327.1-201ENST00000471666 403 ntBASIC5.29□□□□□ -1.56
MRE11P49959 MTND6P6-201ENST00000478031 263 ntBASIC5.29□□□□□ -1.56
MRE11P49959 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.29□□□□□ -1.56
MRE11P49959 AL358832.1-201ENST00000497800 389 ntBASIC5.29□□□□□ -1.56
MRE11P49959 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms