Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.05□□□□□ -1.76
CENPAP49450 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 RNA5SP307-201ENST00000362863 116 ntBASIC4.05□□□□□ -1.76
CENPAP49450 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 RNU1-63P-201ENST00000383902 164 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.05□□□□□ -1.76
CENPAP49450 AC005154.2-201ENST00000438110 379 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AL512286.1-201ENST00000439244 400 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.05□□□□□ -1.76
CENPAP49450 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 AP000936.2-201ENST00000447151 681 ntBASIC4.05□□□□□ -1.76
CENPAP49450 HMGN2P21-201ENST00000447764 270 ntBASIC4.05□□□□□ -1.76
CENPAP49450 PAXBP1P1-201ENST00000449315 447 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 SBDSP1-204ENST00000453858 737 ntBASIC4.05□□□□□ -1.76
CENPAP49450 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 RN7SL481P-201ENST00000477764 299 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC109486.1-201ENST00000486833 374 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC090453.1-201ENST00000495560 436 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC006499.5-201ENST00000505037 514 ntBASIC4.05□□□□□ -1.76
CENPAP49450 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 HIGD1AP3-201ENST00000515857 278 ntBASIC4.05□□□□□ -1.76
CENPAP49450 IGKV2-23-201ENST00000518729 323 ntBASIC4.05□□□□□ -1.76
CENPAP49450 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.05□□□□□ -1.76
CENPAP49450 AC022861.1-201ENST00000522981 663 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AP000676.2-201ENST00000529711 301 ntBASIC4.05□□□□□ -1.76
CENPAP49450 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.05□□□□□ -1.76
CENPAP49450 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.05□□□□□ -1.76
CENPAP49450 GTF2IP22-201ENST00000554443 182 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.05□□□□□ -1.76
CENPAP49450 PCMTD1P2-201ENST00000565017 355 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AL121834.1-201ENST00000572284 509 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AP001004.1-201ENST00000582468 324 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.05□□□□□ -1.76
CENPAP49450 AP002360.3-201ENST00000607673 710 ntBASIC4.05□□□□□ -1.76
CENPAP49450 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.05□□□□□ -1.76
CENPAP49450 AC133644.2-201ENST00000608142 540 ntBASIC4.05□□□□□ -1.76
CENPAP49450 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.05□□□□□ -1.76
CENPAP49450 MIR6730-201ENST00000622213 67 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AC018445.2-201ENST00000622987 260 ntBASIC4.05□□□□□ -1.76
CENPAP49450 AL359715.5-201ENST00000623431 443 ntBASIC4.05□□□□□ -1.76
CENPAP49450 MIR4496-201ENST00000635896 61 ntBASIC4.05□□□□□ -1.76
CENPAP49450 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.05□□□□□ -1.76
CENPAP49450 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 LINC00622-201ENST00000562811 1570 ntBASIC4.05□□□□□ -1.76
CENPAP49450 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 MTCO1P23-201ENST00000415223 1526 ntBASIC4.05□□□□□ -1.76
CENPAP49450 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.05□□□□□ -1.76
CENPAP49450 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CENPAP49450 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CENPAP49450 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.04□□□□□ -1.76
CENPAP49450 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.04□□□□□ -1.76
CENPAP49450 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CENPAP49450 AC139769.1-204ENST00000472297 1931 ntBASIC4.04□□□□□ -1.76
CENPAP49450 U3.4-201ENST00000363352 213 ntBASIC4.04□□□□□ -1.76
CENPAP49450 RNU6-501P-201ENST00000364072 100 ntBASIC4.04□□□□□ -1.76
CENPAP49450 RNU6-289P-201ENST00000364093 107 ntBASIC4.04□□□□□ -1.76
CENPAP49450 SNORD82-201ENST00000365530 70 ntBASIC4.04□□□□□ -1.76
CENPAP49450 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.04□□□□□ -1.76
CENPAP49450 U1.1-201ENST00000384101 164 ntBASIC4.04□□□□□ -1.76
CENPAP49450 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CENPAP49450 AL645927.1-201ENST00000396783 406 ntBASIC4.04□□□□□ -1.76
CENPAP49450 AL031679.1-201ENST00000400616 525 ntBASIC4.04□□□□□ -1.76
CENPAP49450 SNORA74C-2-201ENST00000411179 201 ntBASIC4.04□□□□□ -1.76
CENPAP49450 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.04□□□□□ -1.76
CENPAP49450 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.04□□□□□ -1.76
CENPAP49450 FNDC3CP-201ENST00000420795 1155 ntBASIC4.04□□□□□ -1.76
CENPAP49450 AC104837.2-201ENST00000427236 424 ntBASIC4.04□□□□□ -1.76
CENPAP49450 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.04□□□□□ -1.76
CENPAP49450 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.04□□□□□ -1.76
CENPAP49450 AL132765.1-201ENST00000434165 553 ntBASIC4.04□□□□□ -1.76
CENPAP49450 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.04□□□□□ -1.76
CENPAP49450 LARP1BP3-201ENST00000437229 869 ntBASIC4.04□□□□□ -1.76
CENPAP49450 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.04□□□□□ -1.76
CENPAP49450 CYCSP43-201ENST00000438233 310 ntBASIC4.04□□□□□ -1.76
CENPAP49450 RPL23AP93-201ENST00000440847 484 ntBASIC4.04□□□□□ -1.76
CENPAP49450 TAF9P1-201ENST00000445421 515 ntBASIC4.04□□□□□ -1.76
CENPAP49450 ARPC3P5-201ENST00000448802 534 ntBASIC4.04□□□□□ -1.76
CENPAP49450 TAF9P2-201ENST00000454958 515 ntBASIC4.04□□□□□ -1.76
CENPAP49450 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.04□□□□□ -1.76
CENPAP49450 PABPC1P3-201ENST00000469174 459 ntBASIC4.04□□□□□ -1.76
CENPAP49450 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CENPAP49450 AC116337.2-201ENST00000477662 156 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms