Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.89□□□□□ -1.79
LHX1P48742 LUZP4P1-201ENST00000415420 344 ntBASIC3.89□□□□□ -1.79
LHX1P48742 HMGB3P20-201ENST00000417997 600 ntBASIC3.89□□□□□ -1.79
LHX1P48742 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.89□□□□□ -1.79
LHX1P48742 SDCBPP2-201ENST00000424643 885 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.89□□□□□ -1.79
LHX1P48742 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.89□□□□□ -1.79
LHX1P48742 USP9YP31-201ENST00000431405 881 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.89□□□□□ -1.79
LHX1P48742 CR769776.1-201ENST00000441254 787 ntBASIC3.89□□□□□ -1.79
LHX1P48742 RPL23AP16-201ENST00000441715 421 ntBASIC3.89□□□□□ -1.79
LHX1P48742 RPL23AP76-201ENST00000441860 458 ntBASIC3.89□□□□□ -1.79
LHX1P48742 PTENP1-201ENST00000447117 1215 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LHX1P48742 SNORD11.1-201ENST00000459482 85 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AC006499.5-201ENST00000505037 514 ntBASIC3.89□□□□□ -1.79
LHX1P48742 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.89□□□□□ -1.79
LHX1P48742 AC104619.4-201ENST00000510773 249 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.89□□□□□ -1.79
LHX1P48742 HIGD1AP3-201ENST00000515857 278 ntBASIC3.89□□□□□ -1.79
LHX1P48742 ZNF705CP-201ENST00000530515 889 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AC092470.1-201ENST00000546187 132 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.89□□□□□ -1.79
LHX1P48742 SULT1C2P1-202ENST00000562418 459 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.89□□□□□ -1.79
LHX1P48742 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.89□□□□□ -1.79
LHX1P48742 AL009028.1-201ENST00000604895 802 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AL392048.1-201ENST00000613946 534 ntBASIC3.89□□□□□ -1.79
LHX1P48742 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.89□□□□□ -1.79
LHX1P48742 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.89□□□□□ -1.79
LHX1P48742 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LHX1P48742 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.89□□□□□ -1.79
LHX1P48742 NMD3P1-201ENST00000439704 1488 ntBASIC3.89□□□□□ -1.79
LHX1P48742 MAPK10-253ENST00000641010 4072 ntBASIC3.89□□□□□ -1.79
LHX1P48742 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.89□□□□□ -1.79
LHX1P48742 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.89□□□□□ -1.79
LHX1P48742 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LHX1P48742 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.89□□□□□ -1.79
LHX1P48742 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
LHX1P48742 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.89□□□□□ -1.79
LHX1P48742 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.88□□□□□ -1.79
LHX1P48742 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
LHX1P48742 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LHX1P48742 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.88□□□□□ -1.79
LHX1P48742 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.88□□□□□ -1.79
LHX1P48742 RNU6-560P-201ENST00000364007 108 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RNU6-356P-201ENST00000384140 107 ntBASIC3.88□□□□□ -1.79
LHX1P48742 MIR124-3-201ENST00000384866 87 ntBASIC3.88□□□□□ -1.79
LHX1P48742 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 MTHFD2P2-201ENST00000407725 247 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RNU2-28P-201ENST00000410457 189 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RPS3AP25-201ENST00000411660 793 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AL133384.1-201ENST00000412744 351 ntBASIC3.88□□□□□ -1.79
LHX1P48742 CYP4F29P-201ENST00000420685 446 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AL389915.1-201ENST00000422463 466 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RWDD4P2-201ENST00000426392 563 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC091286.1-201ENST00000431233 461 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RPS6P12-201ENST00000432491 726 ntBASIC3.88□□□□□ -1.79
LHX1P48742 HSPD1P21-201ENST00000436541 245 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RPL7P28-201ENST00000437739 740 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.88□□□□□ -1.79
LHX1P48742 MTCO1P48-201ENST00000448024 1096 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RPL29P29-201ENST00000448725 423 ntBASIC3.88□□□□□ -1.79
LHX1P48742 PDSS1P2-201ENST00000449397 678 ntBASIC3.88□□□□□ -1.79
LHX1P48742 NDUFS5P3-201ENST00000450668 321 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RPL5P24-201ENST00000463742 885 ntBASIC3.88□□□□□ -1.79
LHX1P48742 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.88□□□□□ -1.79
LHX1P48742 KLRA1P-201ENST00000503499 986 ntBASIC3.88□□□□□ -1.79
LHX1P48742 SLC25A15P5-201ENST00000508033 253 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC008837.2-201ENST00000513076 418 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.88□□□□□ -1.79
LHX1P48742 RNU6-1261P-201ENST00000517194 104 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.88□□□□□ -1.79
LHX1P48742 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.88□□□□□ -1.79
LHX1P48742 OR4A45P-201ENST00000529954 901 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC005832.3-201ENST00000537929 631 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC090502.2-201ENST00000549267 280 ntBASIC3.88□□□□□ -1.79
LHX1P48742 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.88□□□□□ -1.79
LHX1P48742 TRAV15-201ENST00000556680 249 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.88□□□□□ -1.79
LHX1P48742 AC090695.1-201ENST00000561269 1222 ntBASIC3.88□□□□□ -1.79
LHX1P48742 BNIP3P26-201ENST00000600827 554 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.88□□□□□ -1.79
LHX1P48742 AC091946.2-201ENST00000606105 291 ntBASIC3.88□□□□□ -1.79
LHX1P48742 MIR92B-201ENST00000607575 96 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC069209.1-201ENST00000619282 651 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC073348.1-201ENST00000623002 331 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AL732618.1-201ENST00000623251 301 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC006963.1-201ENST00000624003 1052 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
LHX1P48742 AC119674.1-207ENST00000641355 633 ntBASIC3.88□□□□□ -1.79
LHX1P48742 AC018555.1-201ENST00000567548 1980 ntBASIC3.88□□□□□ -1.79
LHX1P48742 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 AC008725.1-201ENST00000605123 2263 ntBASIC3.88□□□□□ -1.79
LHX1P48742 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms