Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC097262.1-201ENST00000452559 548 ntBASIC3.61□□□□□ -1.83
SSR1P43307 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.61□□□□□ -1.83
SSR1P43307 RPL21P18-201ENST00000469899 480 ntBASIC3.61□□□□□ -1.83
SSR1P43307 AC025518.1-201ENST00000479856 347 ntBASIC3.61□□□□□ -1.83
SSR1P43307 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.61□□□□□ -1.83
SSR1P43307 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSR1P43307 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.61□□□□□ -1.83
SSR1P43307 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.61□□□□□ -1.83
SSR1P43307 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.61□□□□□ -1.83
SSR1P43307 AC012467.1-201ENST00000607740 256 ntBASIC3.61□□□□□ -1.83
SSR1P43307 MIR7851-201ENST00000610611 160 ntBASIC3.61□□□□□ -1.83
SSR1P43307 RMST_10.1-201ENST00000616309 154 ntBASIC3.61□□□□□ -1.83
SSR1P43307 STMN1P1-201ENST00000617809 440 ntBASIC3.61□□□□□ -1.83
SSR1P43307 AC018926.3-201ENST00000618841 406 ntBASIC3.61□□□□□ -1.83
SSR1P43307 AL731566.2-201ENST00000618971 317 ntBASIC3.61□□□□□ -1.83
SSR1P43307 AC073569.3-201ENST00000619055 682 ntBASIC3.61□□□□□ -1.83
SSR1P43307 LRRC77P-213ENST00000637727 880 ntBASIC3.61□□□□□ -1.83
SSR1P43307 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSR1P43307 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SSR1P43307 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.61□□□□□ -1.83
SSR1P43307 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSR1P43307 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.6□□□□□ -1.83
SSR1P43307 MTND5P11-201ENST00000511037 1812 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
SSR1P43307 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSR1P43307 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SSR1P43307 RNA5SP124-201ENST00000362739 110 ntBASIC3.6□□□□□ -1.83
SSR1P43307 RNA5SP383-201ENST00000362934 120 ntBASIC3.6□□□□□ -1.83
SSR1P43307 SNORA51.4-201ENST00000364993 124 ntBASIC3.6□□□□□ -1.83
SSR1P43307 RNU1-64P-201ENST00000365443 163 ntBASIC3.6□□□□□ -1.83
SSR1P43307 MIR554-201ENST00000384874 96 ntBASIC3.6□□□□□ -1.83
SSR1P43307 BMS1P22-201ENST00000414726 313 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AL356968.1-201ENST00000416622 474 ntBASIC3.6□□□□□ -1.83
SSR1P43307 GTF2IP23-201ENST00000423746 351 ntBASIC3.6□□□□□ -1.83
SSR1P43307 VN1R42P-201ENST00000424651 344 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.6□□□□□ -1.83
SSR1P43307 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.6□□□□□ -1.83
SSR1P43307 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.6□□□□□ -1.83
SSR1P43307 AC073387.1-201ENST00000453261 709 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC020898.1-201ENST00000474167 787 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC015724.1-201ENST00000478577 156 ntBASIC3.6□□□□□ -1.83
SSR1P43307 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.6□□□□□ -1.83
SSR1P43307 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.6□□□□□ -1.83
SSR1P43307 RNU1-95P-201ENST00000516357 160 ntBASIC3.6□□□□□ -1.83
SSR1P43307 RNU1-128P-201ENST00000516704 160 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.6□□□□□ -1.83
SSR1P43307 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.6□□□□□ -1.83
SSR1P43307 AC019227.1-201ENST00000526902 510 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.6□□□□□ -1.83
SSR1P43307 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.6□□□□□ -1.83
SSR1P43307 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.6□□□□□ -1.83
SSR1P43307 MIR4504-201ENST00000577413 92 ntBASIC3.6□□□□□ -1.83
SSR1P43307 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.6□□□□□ -1.83
SSR1P43307 AC091057.2-201ENST00000602594 792 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC079880.2-201ENST00000603790 1213 ntBASIC3.6□□□□□ -1.83
SSR1P43307 HSPE1P14-201ENST00000605812 302 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC006249.1-201ENST00000621223 471 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC022509.4-201ENST00000621404 572 ntBASIC3.6□□□□□ -1.83
SSR1P43307 AC073348.1-201ENST00000623002 331 ntBASIC3.6□□□□□ -1.83
SSR1P43307 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.6□□□□□ -1.83
SSR1P43307 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.6□□□□□ -1.83
SSR1P43307 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSR1P43307 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.6□□□□□ -1.83
SSR1P43307 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSR1P43307 CD24P4-201ENST00000382840 243 ntBASIC3.59□□□□□ -1.83
SSR1P43307 SNORA5A-201ENST00000384111 134 ntBASIC3.59□□□□□ -1.83
SSR1P43307 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SSR1P43307 DSTNP4-201ENST00000399472 474 ntBASIC3.59□□□□□ -1.83
SSR1P43307 RNU4-27P-201ENST00000410889 139 ntBASIC3.59□□□□□ -1.83
SSR1P43307 BX842559.1-201ENST00000419615 532 ntBASIC3.59□□□□□ -1.83
SSR1P43307 MTCYBP24-201ENST00000420387 1106 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.59□□□□□ -1.83
SSR1P43307 AC005517.2-201ENST00000424673 553 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AL512661.1-201ENST00000434586 1253 ntBASIC3.59□□□□□ -1.83
SSR1P43307 ELOCP3-201ENST00000439303 348 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.59□□□□□ -1.83
SSR1P43307 AC008264.1-201ENST00000447612 367 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.59□□□□□ -1.83
SSR1P43307 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SSR1P43307 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSR1P43307 AC111000.2-201ENST00000507775 550 ntBASIC3.59□□□□□ -1.83
SSR1P43307 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.59□□□□□ -1.83
SSR1P43307 RN7SKP96-201ENST00000516948 297 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AC023632.4-201ENST00000517783 191 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.59□□□□□ -1.83
SSR1P43307 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.59□□□□□ -1.83
SSR1P43307 AC020914.6-201ENST00000594327 272 ntBASIC3.59□□□□□ -1.83
SSR1P43307 ZNF92P2-201ENST00000600543 1059 ntBASIC3.59□□□□□ -1.83
SSR1P43307 IGHV3-29-201ENST00000604817 344 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AP001033.2-201ENST00000609701 1003 ntBASIC3.59□□□□□ -1.83
SSR1P43307 AC004696.1-201ENST00000614345 607 ntBASIC3.59□□□□□ -1.83
SSR1P43307 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.59□□□□□ -1.83
SSR1P43307 AL356863.1-201ENST00000623378 1080 ntBASIC3.59□□□□□ -1.83
SSR1P43307 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.59□□□□□ -1.83
SSR1P43307 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.59□□□□□ -1.83
SSR1P43307 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SSR1P43307 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SSR1P43307 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSR1P43307 RNA5SP197-201ENST00000363357 119 ntBASIC3.58□□□□□ -1.84
SSR1P43307 OR52E6-202ENST00000379946 954 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms