Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GABPAP-201ENST00000419271 1356 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AP000776.1-201ENST00000530032 1663 ntBASIC4.13□□□□□ -1.75
HADHAP40939 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HADHAP40939 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HADHAP40939 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HADHAP40939 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HADHAP40939 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
HADHAP40939 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HADHAP40939 USP8P1-201ENST00000494673 3183 ntBASIC4.12□□□□□ -1.75
HADHAP40939 FAM133CP-201ENST00000332869 704 ntBASIC4.12□□□□□ -1.75
HADHAP40939 SNORA57.1-201ENST00000391227 145 ntBASIC4.12□□□□□ -1.75
HADHAP40939 HSPE1P26-201ENST00000405341 275 ntBASIC4.12□□□□□ -1.75
HADHAP40939 MIR1193-201ENST00000408109 78 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HADHAP40939 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.12□□□□□ -1.75
HADHAP40939 AC011742.1-201ENST00000431448 434 ntBASIC4.12□□□□□ -1.75
HADHAP40939 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HADHAP40939 AC006011.1-201ENST00000442758 349 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 RPL12P26-201ENST00000452430 487 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC087312.1-201ENST00000471411 480 ntBASIC4.12□□□□□ -1.75
HADHAP40939 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HADHAP40939 RN7SL604P-201ENST00000492589 296 ntBASIC4.12□□□□□ -1.75
HADHAP40939 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HADHAP40939 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HADHAP40939 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.12□□□□□ -1.75
HADHAP40939 AC010587.2-201ENST00000511727 448 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
HADHAP40939 AC104986.1-201ENST00000517978 436 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.12□□□□□ -1.75
HADHAP40939 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.12□□□□□ -1.75
HADHAP40939 CYCSP29-201ENST00000533731 318 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.12□□□□□ -1.75
HADHAP40939 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 AC025884.1-201ENST00000556034 378 ntBASIC4.12□□□□□ -1.75
HADHAP40939 ZNF192P1-203ENST00000565888 810 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC012182.1-201ENST00000570133 895 ntBASIC4.12□□□□□ -1.75
HADHAP40939 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 AC103881.1-201ENST00000603476 538 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC124312.4-201ENST00000605533 310 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC006329.2-201ENST00000611491 394 ntBASIC4.12□□□□□ -1.75
HADHAP40939 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.12□□□□□ -1.75
HADHAP40939 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 AC008993.2-201ENST00000631744 806 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AC116618.1-201ENST00000634617 774 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AL773545.4-201ENST00000637262 310 ntBASIC4.12□□□□□ -1.75
HADHAP40939 MIR492-201ENST00000638676 116 ntBASIC4.12□□□□□ -1.75
HADHAP40939 AL513478.4-201ENST00000641636 310 ntBASIC4.12□□□□□ -1.75
HADHAP40939 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HADHAP40939 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 ZNF962P-201ENST00000443465 3140 ntBASIC4.12□□□□□ -1.75
HADHAP40939 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HADHAP40939 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 AC027287.1-201ENST00000553115 1453 ntBASIC4.11□□□□□ -1.75
HADHAP40939 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 BDP1P-201ENST00000582658 1990 ntBASIC4.11□□□□□ -1.75
HADHAP40939 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 RNU6-335P-201ENST00000364563 113 ntBASIC4.11□□□□□ -1.75
HADHAP40939 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.11□□□□□ -1.75
HADHAP40939 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.11□□□□□ -1.75
HADHAP40939 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.11□□□□□ -1.75
HADHAP40939 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 AC096638.2-201ENST00000434965 711 ntBASIC4.11□□□□□ -1.75
HADHAP40939 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.11□□□□□ -1.75
HADHAP40939 ARPC3P5-201ENST00000448802 534 ntBASIC4.11□□□□□ -1.75
HADHAP40939 HMGB3P22-202ENST00000451823 572 ntBASIC4.11□□□□□ -1.75
HADHAP40939 SUMO2P2-201ENST00000456482 255 ntBASIC4.11□□□□□ -1.75
HADHAP40939 CEACAMP4-201ENST00000457676 421 ntBASIC4.11□□□□□ -1.75
HADHAP40939 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.11□□□□□ -1.75
HADHAP40939 AC090453.1-201ENST00000495560 436 ntBASIC4.11□□□□□ -1.75
HADHAP40939 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 AC093824.1-201ENST00000508796 343 ntBASIC4.11□□□□□ -1.75
HADHAP40939 RNU7-143P-201ENST00000516781 65 ntBASIC4.11□□□□□ -1.75
HADHAP40939 OR5AK1P-201ENST00000524837 922 ntBASIC4.11□□□□□ -1.75
HADHAP40939 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.11□□□□□ -1.75
HADHAP40939 AL512347.1-201ENST00000566420 503 ntBASIC4.11□□□□□ -1.75
HADHAP40939 RPL23AP87-202ENST00000573039 466 ntBASIC4.11□□□□□ -1.75
HADHAP40939 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.11□□□□□ -1.75
HADHAP40939 AC012417.1-201ENST00000582307 1039 ntBASIC4.11□□□□□ -1.75
HADHAP40939 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 SNRPGP15-201ENST00000600149 222 ntBASIC4.11□□□□□ -1.75
HADHAP40939 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 HMGN2P28-201ENST00000606102 262 ntBASIC4.11□□□□□ -1.75
HADHAP40939 AC080013.3-201ENST00000606839 578 ntBASIC4.11□□□□□ -1.75
HADHAP40939 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HADHAP40939 AC010608.2-201ENST00000624830 470 ntBASIC4.11□□□□□ -1.75
HADHAP40939 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms