Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL3P39023 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 AL365184.2-201ENST00000431139 435 ntBASIC3.94□□□□□ -1.78
RPL3P39023 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL3P39023 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.94□□□□□ -1.78
RPL3P39023 NDUFA12P1-201ENST00000455914 406 ntBASIC3.94□□□□□ -1.78
RPL3P39023 RNU7-136P-201ENST00000458819 69 ntBASIC3.94□□□□□ -1.78
RPL3P39023 RNU6-956P-201ENST00000458868 103 ntBASIC3.94□□□□□ -1.78
RPL3P39023 MEMO1P3-201ENST00000459811 302 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL3P39023 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 AC116337.2-201ENST00000477662 156 ntBASIC3.94□□□□□ -1.78
RPL3P39023 RN7SL691P-201ENST00000494487 301 ntBASIC3.94□□□□□ -1.78
RPL3P39023 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL3P39023 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL3P39023 PGBD4P4-201ENST00000509673 613 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC110792.2-201ENST00000510278 224 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC008958.1-201ENST00000511047 682 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC079140.3-201ENST00000511111 550 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.94□□□□□ -1.78
RPL3P39023 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 ZNF705CP-201ENST00000530515 889 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC022880.1-201ENST00000534017 973 ntBASIC3.94□□□□□ -1.78
RPL3P39023 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
RPL3P39023 AC008127.2-201ENST00000549925 1075 ntBASIC3.94□□□□□ -1.78
RPL3P39023 CR383656.6-201ENST00000550518 394 ntBASIC3.94□□□□□ -1.78
RPL3P39023 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.94□□□□□ -1.78
RPL3P39023 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL3P39023 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 AC141257.3-201ENST00000572906 215 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AP001004.1-201ENST00000582468 324 ntBASIC3.94□□□□□ -1.78
RPL3P39023 MIR3611-201ENST00000584484 83 ntBASIC3.94□□□□□ -1.78
RPL3P39023 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL3P39023 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL3P39023 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL3P39023 AC004987.4-201ENST00000603383 338 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC113194.1-201ENST00000606037 500 ntBASIC3.94□□□□□ -1.78
RPL3P39023 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL3P39023 AC012603.1-201ENST00000606424 528 ntBASIC3.94□□□□□ -1.78
RPL3P39023 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 MTCO1P23-201ENST00000415223 1526 ntBASIC3.94□□□□□ -1.78
RPL3P39023 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RPL3P39023 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPL3P39023 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RPL3P39023 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPL3P39023 OR10J6P-201ENST00000289731 930 ntBASIC3.93□□□□□ -1.78
RPL3P39023 OR52B1P-201ENST00000316506 909 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC011155.1-201ENST00000316512 456 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RPL3P39023 SNORA60-201ENST00000362396 134 ntBASIC3.93□□□□□ -1.78
RPL3P39023 Y_RNA.97-201ENST00000363094 102 ntBASIC3.93□□□□□ -1.78
RPL3P39023 RNA5SP447-201ENST00000363749 119 ntBASIC3.93□□□□□ -1.78
RPL3P39023 RNU6-1243P-201ENST00000364028 107 ntBASIC3.93□□□□□ -1.78
RPL3P39023 RNU6-501P-201ENST00000364072 100 ntBASIC3.93□□□□□ -1.78
RPL3P39023 RNA5SP505-201ENST00000364748 108 ntBASIC3.93□□□□□ -1.78
RPL3P39023 Y_RNA.359-201ENST00000365498 102 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPL3P39023 AC016769.3-201ENST00000396562 315 ntBASIC3.93□□□□□ -1.78
RPL3P39023 RNA5SP39-201ENST00000411245 120 ntBASIC3.93□□□□□ -1.78
RPL3P39023 ELOCP19-201ENST00000411919 318 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AL133384.1-201ENST00000412744 351 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC011933.1-201ENST00000413334 321 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AL590609.2-201ENST00000421430 368 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.93□□□□□ -1.78
RPL3P39023 AC096632.1-201ENST00000427395 310 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.93□□□□□ -1.78
RPL3P39023 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL3P39023 ATP5C1P1-201ENST00000441945 895 ntBASIC3.93□□□□□ -1.78
RPL3P39023 COX6CP12-201ENST00000446748 202 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AL451050.1-201ENST00000450126 415 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.93□□□□□ -1.78
RPL3P39023 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.93□□□□□ -1.78
RPL3P39023 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPL3P39023 AC104073.1-201ENST00000451988 151 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC116533.1-201ENST00000459748 321 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC109327.1-201ENST00000471666 403 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AL136126.1-201ENST00000473603 402 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC010683.1-201ENST00000473673 378 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC108941.1-201ENST00000502853 530 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC139783.2-201ENST00000504847 1145 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL3P39023 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.93□□□□□ -1.78
RPL3P39023 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.93□□□□□ -1.78
RPL3P39023 AC016065.2-201ENST00000514530 444 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.93□□□□□ -1.78
RPL3P39023 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL3P39023 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL3P39023 AP002963.1-201ENST00000530590 184 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AP000873.5-201ENST00000533906 236 ntBASIC3.93□□□□□ -1.78
RPL3P39023 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms