Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.32□□□□□ -1.88
RORAP35398 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
RORAP35398 AC091488.1-201ENST00000604239 660 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC016877.3-201ENST00000606778 504 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC096586.1-201ENST00000610267 561 ntBASIC3.32□□□□□ -1.88
RORAP35398 AL512506.1-201ENST00000613918 449 ntBASIC3.32□□□□□ -1.88
RORAP35398 VN1R9P-201ENST00000614184 867 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC020923.1-201ENST00000624021 917 ntBASIC3.32□□□□□ -1.88
RORAP35398 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.32□□□□□ -1.88
RORAP35398 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
RORAP35398 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
RORAP35398 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RORAP35398 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RORAP35398 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RORAP35398 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RORAP35398 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RORAP35398 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.31□□□□□ -1.88
RORAP35398 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RORAP35398 AC016716.1-201ENST00000265882 708 ntBASIC3.31□□□□□ -1.88
RORAP35398 RPL7P26-201ENST00000333817 754 ntBASIC3.31□□□□□ -1.88
RORAP35398 FRG1CP-201ENST00000358464 769 ntBASIC3.31□□□□□ -1.88
RORAP35398 RNU6-50P-201ENST00000362356 103 ntBASIC3.31□□□□□ -1.88
RORAP35398 MIR491-201ENST00000384877 84 ntBASIC3.31□□□□□ -1.88
RORAP35398 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RORAP35398 AL391417.1-201ENST00000404100 426 ntBASIC3.31□□□□□ -1.88
RORAP35398 PTGES3P2-201ENST00000407942 482 ntBASIC3.31□□□□□ -1.88
RORAP35398 RNA5SP129-201ENST00000410276 118 ntBASIC3.31□□□□□ -1.88
RORAP35398 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.31□□□□□ -1.88
RORAP35398 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
RORAP35398 OSTCP5-201ENST00000425293 453 ntBASIC3.31□□□□□ -1.88
RORAP35398 MTATP6P11-201ENST00000428071 670 ntBASIC3.31□□□□□ -1.88
RORAP35398 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.31□□□□□ -1.88
RORAP35398 RPS29P31-201ENST00000446147 164 ntBASIC3.31□□□□□ -1.88
RORAP35398 Z99714.1-201ENST00000450463 807 ntBASIC3.31□□□□□ -1.88
RORAP35398 SSXP4-201ENST00000451349 245 ntBASIC3.31□□□□□ -1.88
RORAP35398 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.31□□□□□ -1.88
RORAP35398 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.31□□□□□ -1.88
RORAP35398 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
RORAP35398 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.31□□□□□ -1.88
RORAP35398 TXNP6-201ENST00000510190 310 ntBASIC3.31□□□□□ -1.88
RORAP35398 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.31□□□□□ -1.88
RORAP35398 AP006245.1-201ENST00000522549 120 ntBASIC3.31□□□□□ -1.88
RORAP35398 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.31□□□□□ -1.88
RORAP35398 TRAV37-201ENST00000553906 342 ntBASIC3.31□□□□□ -1.88
RORAP35398 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.31□□□□□ -1.88
RORAP35398 AC079148.1-201ENST00000565944 819 ntBASIC3.31□□□□□ -1.88
RORAP35398 AC012182.1-201ENST00000570133 895 ntBASIC3.31□□□□□ -1.88
RORAP35398 MIR5195-201ENST00000583555 115 ntBASIC3.31□□□□□ -1.88
RORAP35398 AC008687.2-201ENST00000597865 520 ntBASIC3.31□□□□□ -1.88
RORAP35398 AL356094.1-201ENST00000624663 1212 ntBASIC3.31□□□□□ -1.88
RORAP35398 AC097372.4-201ENST00000625025 466 ntBASIC3.31□□□□□ -1.88
RORAP35398 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.31□□□□□ -1.88
RORAP35398 AL356118.1-201ENST00000635272 1078 ntBASIC3.31□□□□□ -1.88
RORAP35398 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RORAP35398 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RORAP35398 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RORAP35398 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RORAP35398 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RORAP35398 RNU6-283P-201ENST00000364788 107 ntBASIC3.3□□□□□ -1.88
RORAP35398 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RORAP35398 ATP5F1P6-201ENST00000402768 767 ntBASIC3.3□□□□□ -1.88
RORAP35398 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.3□□□□□ -1.88
RORAP35398 HSFY4P-201ENST00000415994 1181 ntBASIC3.3□□□□□ -1.88
RORAP35398 AL606495.1-201ENST00000422100 813 ntBASIC3.3□□□□□ -1.88
RORAP35398 AC005326.1-201ENST00000429197 123 ntBASIC3.3□□□□□ -1.88
RORAP35398 UBE2V1P1-201ENST00000430836 445 ntBASIC3.3□□□□□ -1.88
RORAP35398 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.3□□□□□ -1.88
RORAP35398 AC004865.1-201ENST00000442276 1003 ntBASIC3.3□□□□□ -1.88
RORAP35398 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.3□□□□□ -1.88
RORAP35398 MTND1P33-201ENST00000446251 917 ntBASIC3.3□□□□□ -1.88
RORAP35398 NECAP1P2-201ENST00000455668 727 ntBASIC3.3□□□□□ -1.88
RORAP35398 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.3□□□□□ -1.88
RORAP35398 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 RPL21P10-201ENST00000463521 490 ntBASIC3.3□□□□□ -1.88
RORAP35398 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
RORAP35398 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.3□□□□□ -1.88
RORAP35398 AC016065.2-201ENST00000514530 444 ntBASIC3.3□□□□□ -1.88
RORAP35398 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.3□□□□□ -1.88
RORAP35398 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.3□□□□□ -1.88
RORAP35398 SNORA70.24-201ENST00000517233 118 ntBASIC3.3□□□□□ -1.88
RORAP35398 AP003168.1-201ENST00000530091 307 ntBASIC3.3□□□□□ -1.88
RORAP35398 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.3□□□□□ -1.88
RORAP35398 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.3□□□□□ -1.88
RORAP35398 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 MIR3200-201ENST00000580767 85 ntBASIC3.3□□□□□ -1.88
RORAP35398 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.3□□□□□ -1.88
RORAP35398 AC005776.1-201ENST00000603164 290 ntBASIC3.3□□□□□ -1.88
RORAP35398 AL590282.1-201ENST00000610379 1136 ntBASIC3.3□□□□□ -1.88
RORAP35398 MIR8084-201ENST00000614105 89 ntBASIC3.3□□□□□ -1.88
RORAP35398 AC107081.3-201ENST00000612715 2034 ntBASIC3.3□□□□□ -1.88
RORAP35398 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RORAP35398 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RORAP35398 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RORAP35398 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms