Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRMP28827 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
PTPRMP28827 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRMP28827 AC245291.1-201ENST00000419501 328 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.9□□□□□ -1.79
PTPRMP28827 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRMP28827 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPRMP28827 AL591623.2-201ENST00000449978 222 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 RN7SKP210-201ENST00000459176 261 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPRMP28827 MTND4P2-201ENST00000507767 1203 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 SCARNA17.1-201ENST00000516211 143 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 SCARNA17.2-201ENST00000516334 143 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.9□□□□□ -1.79
PTPRMP28827 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPRMP28827 AL391156.1-201ENST00000554965 554 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 AC025946.2-201ENST00000603398 234 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 SCARNA17.4-201ENST00000614296 143 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 AL355493.4-201ENST00000618530 292 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 AP000526.1-201ENST00000603308 1388 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRMP28827 AC002543.1-201ENST00000299783 1954 ntBASIC3.9□□□□□ -1.79
PTPRMP28827 AC092881.1-201ENST00000638218 2733 ntBASIC3.89□□□□□ -1.79
PTPRMP28827 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPRMP28827 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPRMP28827 SNORD62.1-201ENST00000362541 86 ntBASIC3.89□□□□□ -1.79
PTPRMP28827 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPRMP28827 BTG3P1-201ENST00000435859 716 ntBASIC3.89□□□□□ -1.79
PTPRMP28827 VWA8P1-201ENST00000510889 176 ntBASIC3.89□□□□□ -1.79
PTPRMP28827 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPRMP28827 AC078814.3-201ENST00000553036 491 ntBASIC3.89□□□□□ -1.79
PTPRMP28827 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPRMP28827 AC010928.3-201ENST00000587712 541 ntBASIC3.89□□□□□ -1.79
PTPRMP28827 AC104237.2-201ENST00000612456 443 ntBASIC3.89□□□□□ -1.79
PTPRMP28827 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPRMP28827 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPRMP28827 PROS2P-201ENST00000474651 1951 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPRMP28827 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRMP28827 AC104454.1-201ENST00000421341 1401 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 RNA5SP383-201ENST00000362934 120 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPRMP28827 RPL31P12-201ENST00000422587 358 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRMP28827 AC112220.1-201ENST00000434628 355 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRMP28827 RN7SL442P-201ENST00000473804 320 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 TRBV1-201ENST00000476502 284 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 AC243972.3-201ENST00000539655 198 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPRMP28827 AC008121.2-201ENST00000614647 523 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPRMP28827 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPRMP28827 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPRMP28827 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRMP28827 PWAR6-201ENST00000552334 4618 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRMP28827 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRMP28827 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.88□□□□□ -1.79
PTPRMP28827 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRMP28827 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPRMP28827 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPRMP28827 RPL31P1-201ENST00000398116 372 ntBASIC3.87□□□□□ -1.79
PTPRMP28827 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
PTPRMP28827 AC108471.1-201ENST00000513977 287 ntBASIC3.87□□□□□ -1.79
PTPRMP28827 AC034244.2-201ENST00000514668 858 ntBASIC3.87□□□□□ -1.79
PTPRMP28827 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPRMP28827 AC007424.1-203ENST00000554613 687 ntBASIC3.87□□□□□ -1.79
PTPRMP28827 AL109741.3-201ENST00000561748 592 ntBASIC3.87□□□□□ -1.79
PTPRMP28827 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPRMP28827 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPRMP28827 OR4G11P-201ENST00000492842 939 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 RN7SL636P-201ENST00000497504 294 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 AC116337.1-201ENST00000509680 687 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 AC068313.1-201ENST00000604028 1008 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPRMP28827 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPRMP28827 AC009487.2-201ENST00000420969 6821 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPRMP28827 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPRMP28827 OR52B1P-201ENST00000316506 909 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 RNU1-73P-201ENST00000383971 164 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPRMP28827 AC007064.1-201ENST00000412238 351 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPRMP28827 AL589765.3-201ENST00000446084 462 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 AC093663.2-201ENST00000484625 313 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 AC118282.1-201ENST00000506408 765 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 FAM60DP-201ENST00000524174 632 ntBASIC3.86□□□□□ -1.79
PTPRMP28827 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
PTPRMP28827 XPOTP1-201ENST00000443317 2398 ntBASIC3.85□□□□□ -1.79
PTPRMP28827 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTPRMP28827 RNU1-35P-201ENST00000362782 153 ntBASIC3.85□□□□□ -1.79
PTPRMP28827 BTF3P7-201ENST00000407097 488 ntBASIC3.85□□□□□ -1.79
PTPRMP28827 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPRMP28827 SEPT7P3-201ENST00000455017 621 ntBASIC3.85□□□□□ -1.79
PTPRMP28827 MTCYBP14-201ENST00000457471 715 ntBASIC3.85□□□□□ -1.79
PTPRMP28827 AC068587.2-201ENST00000478386 781 ntBASIC3.85□□□□□ -1.79
PTPRMP28827 AC093278.1-201ENST00000494700 600 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms