Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TPTE2P5-203ENST00000458118 728 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 RPL7P15-201ENST00000461190 712 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFSF4P23510 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF4P23510 MLLT10P2-201ENST00000506434 249 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 KLHL2P1-201ENST00000508691 521 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF4P23510 AC021146.1-201ENST00000511202 716 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 Y_RNA.655-201ENST00000515919 96 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 RNA5SP497-201ENST00000516081 97 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFSF4P23510 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.26□□□□□ -1.73
TNFSF4P23510 OR5M7P-201ENST00000526140 972 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.26□□□□□ -1.73
TNFSF4P23510 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF4P23510 PCNPP1-201ENST00000552501 511 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF4P23510 AL157394.1-201ENST00000562983 1224 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 COX6CP3-201ENST00000580869 223 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF4P23510 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 RNU6-87P-201ENST00000607561 108 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AP005432.2-201ENST00000608162 586 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AC109347.2-201ENST00000610220 349 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AL355472.4-201ENST00000610233 626 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 AP001506.1-201ENST00000615444 211 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AL360181.4-201ENST00000621752 134 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AC112204.3-201ENST00000623822 332 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AL138713.1-201ENST00000624026 2130 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF4P23510 AC099654.13-201ENST00000639774 207 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF4P23510 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 OR14L1P-202ENST00000641545 3009 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 SCN1A-220ENST00000641603 12506 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 AC139713.2-214ENST00000642059 1811 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC099654.2-201ENST00000433031 1980 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TNFSF4P23510 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 RNU6-173P-201ENST00000364215 104 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 RNA5SP428-201ENST00000365129 132 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 Y_RNA.559-201ENST00000384686 107 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TNFSF4P23510 RNU6-754P-201ENST00000391166 107 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 CCNG1P1-201ENST00000406783 885 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 RPS3AP3-201ENST00000411933 242 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 SPA17P1-201ENST00000416656 452 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 DUTP6-201ENST00000425573 462 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 PGBD4P3-201ENST00000440731 581 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 RPL17P49-201ENST00000443728 411 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 TPT1P14-201ENST00000448018 505 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 OR9M1P-201ENST00000459641 921 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC110792.1-201ENST00000491826 472 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 RPL7P24-201ENST00000493052 752 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC113430.1-201ENST00000506872 718 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC109464.2-201ENST00000510242 943 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 RNU6-798P-201ENST00000516912 103 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 RNU6-1073P-201ENST00000517182 106 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC022882.1-201ENST00000532142 501 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC040958.1-201ENST00000561102 201 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 BNIP3P5-201ENST00000562290 498 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 MIR3682-201ENST00000581338 84 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms