Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HMGB1P50-201ENST00000605814 607 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 HMGN2P28-201ENST00000606102 262 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC024257.5-201ENST00000612739 531 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFRAP16234 AC090116.1-201ENST00000615679 446 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 MIR4509-1-201ENST00000618224 94 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC034229.5-201ENST00000624258 185 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFRAP16234 MKKS-204ENST00000639674 192 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AP001148.1-201ENST00000624124 2359 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFRAP16234 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFRAP16234 AL157700.1-201ENST00000561973 1432 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFRAP16234 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFRAP16234 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PDGFRAP16234 SNORA51.6-201ENST00000384151 125 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 RNU6-339P-201ENST00000384310 107 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 SNORD116-12-201ENST00000384468 92 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 PTMAP5-201ENST00000393073 333 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 SOD2P1-201ENST00000396543 562 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 ATP5F1P4-201ENST00000397288 746 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.92□□□□□ -1.78
PDGFRAP16234 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.92□□□□□ -1.78
PDGFRAP16234 AL035246.1-201ENST00000433554 1255 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 Z95327.1-201ENST00000446082 482 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.92□□□□□ -1.78
PDGFRAP16234 UBDP1-202ENST00000457888 382 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.92□□□□□ -1.78
PDGFRAP16234 MTCYBP16-201ENST00000509187 1129 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.92□□□□□ -1.78
PDGFRAP16234 AC087808.1-201ENST00000520501 361 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.92□□□□□ -1.78
PDGFRAP16234 MTND3P13-201ENST00000574391 343 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.92□□□□□ -1.78
PDGFRAP16234 VN1R83P-201ENST00000595685 445 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 AL390838.2-201ENST00000602394 274 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 AL163642.2-201ENST00000604722 1019 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PDGFRAP16234 AC090772.4-201ENST00000623599 362 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFRAP16234 U6.98-201ENST00000637157 84 ntBASIC3.92□□□□□ -1.78
PDGFRAP16234 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFRAP16234 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFRAP16234 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFRAP16234 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFRAP16234 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFRAP16234 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PDGFRAP16234 RNA5SP124-201ENST00000362739 110 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 RNA5SP322-201ENST00000363617 119 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 RNVU1-3-201ENST00000364313 161 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 SNORA62.3-201ENST00000365110 153 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PDGFRAP16234 U8.11-201ENST00000384699 133 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 U8.12-201ENST00000384701 133 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 MTND4LP20-201ENST00000402379 270 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 RPL7P44-201ENST00000424827 742 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 BMS1P19-201ENST00000433925 393 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PDGFRAP16234 NOTCH2P1-201ENST00000443481 624 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFRAP16234 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFRAP16234 U8.18-201ENST00000459285 133 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 RN7SL93P-201ENST00000463035 293 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 PABPC1P3-201ENST00000469174 459 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 SYPL1P1-201ENST00000473622 768 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 RPL23AP44-201ENST00000482216 473 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PDGFRAP16234 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFRAP16234 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFRAP16234 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFRAP16234 RNU6-1261P-201ENST00000517194 104 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFRAP16234 NARSP2-201ENST00000518524 679 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFRAP16234 AP003385.6-201ENST00000531603 374 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFRAP16234 TRAV15-201ENST00000556680 249 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFRAP16234 GTF2IP8-201ENST00000560687 584 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.91□□□□□ -1.78
PDGFRAP16234 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFRAP16234 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.91□□□□□ -1.78
PDGFRAP16234 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFRAP16234 AC011458.1-201ENST00000604034 617 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFRAP16234 AL121772.2-201ENST00000614331 297 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 AC023158.2-201ENST00000614876 543 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 AC008083.4-201ENST00000615076 444 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 AL158163.2-201ENST00000619110 700 ntBASIC3.91□□□□□ -1.78
PDGFRAP16234 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFRAP16234 LINC02211-204ENST00000642024 1070 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms