Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH1P12830 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH1P12830 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH1P12830 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH1P12830 RNU6-500P-201ENST00000362349 107 ntBASIC3.91□□□□□ -1.78
CDH1P12830 SNORA60-201ENST00000362396 134 ntBASIC3.91□□□□□ -1.78
CDH1P12830 RNA5SP130-201ENST00000364431 114 ntBASIC3.91□□□□□ -1.78
CDH1P12830 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH1P12830 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH1P12830 SNORA70C-201ENST00000384538 135 ntBASIC3.91□□□□□ -1.78
CDH1P12830 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH1P12830 ENSAP1-201ENST00000392855 326 ntBASIC3.91□□□□□ -1.78
CDH1P12830 RPS3AP26-201ENST00000398259 784 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AL450338.1-201ENST00000407987 512 ntBASIC3.91□□□□□ -1.78
CDH1P12830 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.91□□□□□ -1.78
CDH1P12830 TIMM9P2-201ENST00000419324 266 ntBASIC3.91□□□□□ -1.78
CDH1P12830 MTCO3P1-205ENST00000422088 832 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AL035407.1-201ENST00000429211 571 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AL590103.1-201ENST00000434488 307 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 AL356276.2-201ENST00000435919 558 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC129850.1-201ENST00000436203 508 ntBASIC3.91□□□□□ -1.78
CDH1P12830 MTCO2P16-201ENST00000436962 677 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC241584.1-201ENST00000438469 1241 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.91□□□□□ -1.78
CDH1P12830 TAF9P1-201ENST00000445421 515 ntBASIC3.91□□□□□ -1.78
CDH1P12830 MTCO2P7-201ENST00000446518 666 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC009961.3-201ENST00000449832 765 ntBASIC3.91□□□□□ -1.78
CDH1P12830 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH1P12830 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH1P12830 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 TAF9P2-201ENST00000454958 515 ntBASIC3.91□□□□□ -1.78
CDH1P12830 PPIAP21-201ENST00000464473 501 ntBASIC3.91□□□□□ -1.78
CDH1P12830 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH1P12830 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.91□□□□□ -1.78
CDH1P12830 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH1P12830 HMGB1P28-201ENST00000507778 552 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH1P12830 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH1P12830 RNU6-488P-201ENST00000515918 99 ntBASIC3.91□□□□□ -1.78
CDH1P12830 IGKV2D-23-201ENST00000518179 286 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.91□□□□□ -1.78
CDH1P12830 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH1P12830 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH1P12830 AC069304.2-201ENST00000605154 435 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AL591034.3-201ENST00000605511 685 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC006270.3-201ENST00000605967 1036 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC091946.2-201ENST00000606105 291 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 AC092653.1-201ENST00000608509 531 ntBASIC3.91□□□□□ -1.78
CDH1P12830 AC023043.4-201ENST00000612081 449 ntBASIC3.91□□□□□ -1.78
CDH1P12830 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH1P12830 PCMTD1P7-201ENST00000634506 357 ntBASIC3.91□□□□□ -1.78
CDH1P12830 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH1P12830 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
CDH1P12830 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH1P12830 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CDH1P12830 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH1P12830 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH1P12830 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CDH1P12830 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CDH1P12830 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH1P12830 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH1P12830 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH1P12830 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH1P12830 AL022722.2-201ENST00000402519 180 ntBASIC3.9□□□□□ -1.79
CDH1P12830 AL121978.1-201ENST00000402778 359 ntBASIC3.9□□□□□ -1.79
CDH1P12830 HNRNPDP2-201ENST00000406475 478 ntBASIC3.9□□□□□ -1.79
CDH1P12830 RNU6-920P-201ENST00000410926 92 ntBASIC3.9□□□□□ -1.79
CDH1P12830 RHEBP3-201ENST00000411920 351 ntBASIC3.9□□□□□ -1.79
CDH1P12830 OR8G2P-201ENST00000412796 908 ntBASIC3.9□□□□□ -1.79
CDH1P12830 AC244035.1-201ENST00000430042 390 ntBASIC3.9□□□□□ -1.79
CDH1P12830 MTND1P20-201ENST00000430341 950 ntBASIC3.9□□□□□ -1.79
CDH1P12830 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH1P12830 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH1P12830 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.9□□□□□ -1.79
CDH1P12830 MTCO3P5-201ENST00000433620 714 ntBASIC3.9□□□□□ -1.79
CDH1P12830 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH1P12830 AC096638.2-201ENST00000434965 711 ntBASIC3.9□□□□□ -1.79
CDH1P12830 YWHAZP8-201ENST00000436935 731 ntBASIC3.9□□□□□ -1.79
CDH1P12830 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH1P12830 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH1P12830 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH1P12830 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH1P12830 AL645939.1-201ENST00000453429 797 ntBASIC3.9□□□□□ -1.79
CDH1P12830 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH1P12830 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH1P12830 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH1P12830 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH1P12830 AC104685.1-201ENST00000502445 371 ntBASIC3.9□□□□□ -1.79
CDH1P12830 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH1P12830 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms