Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 RN7SKP234-201ENST00000517173 224 ntBASIC2.57□□□□□ -2
TPRP12270 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TPRP12270 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.57□□□□□ -2
TPRP12270 GNAI2P1-201ENST00000541815 315 ntBASIC2.57□□□□□ -2
TPRP12270 TGIF1P1-201ENST00000558095 802 ntBASIC2.57□□□□□ -2
TPRP12270 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.57□□□□□ -2
TPRP12270 AC079298.2-201ENST00000623885 459 ntBASIC2.57□□□□□ -2
TPRP12270 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
TPRP12270 AC000123.3-201ENST00000624029 4975 ntBASIC2.56□□□□□ -2
TPRP12270 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TPRP12270 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
TPRP12270 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.56□□□□□ -2
TPRP12270 MFSD8-233ENST00000641482 4860 ntBASIC2.56□□□□□ -2
TPRP12270 Y_RNA.374-201ENST00000365606 101 ntBASIC2.56□□□□□ -2
TPRP12270 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.56□□□□□ -2
TPRP12270 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.56□□□□□ -2
TPRP12270 BX679664.1-201ENST00000434429 253 ntBASIC2.56□□□□□ -2
TPRP12270 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.56□□□□□ -2
TPRP12270 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.56□□□□□ -2
TPRP12270 RANP3-201ENST00000530970 276 ntBASIC2.56□□□□□ -2
TPRP12270 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.56□□□□□ -2
TPRP12270 OOSP1P2-201ENST00000579644 351 ntBASIC2.56□□□□□ -2
TPRP12270 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.56□□□□□ -2
TPRP12270 MIR378A-201ENST00000362177 66 ntBASIC2.56□□□□□ -2
TPRP12270 SKINT1L-201ENST00000401057 817 ntBASIC2.56□□□□□ -2
TPRP12270 HMGB3P18-201ENST00000406327 590 ntBASIC2.56□□□□□ -2
TPRP12270 RNU6-321P-201ENST00000410912 106 ntBASIC2.56□□□□□ -2
TPRP12270 FCF1P1-201ENST00000432690 571 ntBASIC2.56□□□□□ -2
TPRP12270 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.56□□□□□ -2
TPRP12270 HMGN1P18-201ENST00000457642 277 ntBASIC2.56□□□□□ -2
TPRP12270 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
TPRP12270 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.56□□□□□ -2
TPRP12270 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.56□□□□□ -2
TPRP12270 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.56□□□□□ -2
TPRP12270 AC004696.1-201ENST00000614345 607 ntBASIC2.56□□□□□ -2
TPRP12270 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.55□□□□□ -2
TPRP12270 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
TPRP12270 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.55□□□□□ -2
TPRP12270 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.55□□□□□ -2
TPRP12270 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.55□□□□□ -2
TPRP12270 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
TPRP12270 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.55□□□□□ -2
TPRP12270 RPS20P5-201ENST00000434808 360 ntBASIC2.55□□□□□ -2
TPRP12270 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.55□□□□□ -2
TPRP12270 NPM1P49-201ENST00000448027 714 ntBASIC2.55□□□□□ -2
TPRP12270 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.55□□□□□ -2
TPRP12270 AC021205.2-201ENST00000480069 347 ntBASIC2.55□□□□□ -2
TPRP12270 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.55□□□□□ -2
TPRP12270 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.55□□□□□ -2
TPRP12270 MIR4738-201ENST00000579134 87 ntBASIC2.55□□□□□ -2
TPRP12270 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.55□□□□□ -2
TPRP12270 SNORA4-201ENST00000584302 138 ntBASIC2.55□□□□□ -2
TPRP12270 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.55□□□□□ -2
TPRP12270 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.55□□□□□ -2
TPRP12270 AL451049.1-201ENST00000608672 497 ntBASIC2.55□□□□□ -2
TPRP12270 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.55□□□□□ -2
TPRP12270 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
TPRP12270 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TPRP12270 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.55□□□□□ -2
TPRP12270 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TPRP12270 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.55□□□□□ -2
TPRP12270 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.55□□□□□ -2
TPRP12270 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TPRP12270 RNU6-582P-201ENST00000362989 107 ntBASIC2.54□□□□□ -2
TPRP12270 U8.13-201ENST00000390842 128 ntBASIC2.54□□□□□ -2
TPRP12270 SNORA26.9-201ENST00000391322 122 ntBASIC2.54□□□□□ -2
TPRP12270 Z99127.2-201ENST00000441426 334 ntBASIC2.54□□□□□ -2
TPRP12270 AC008716.1-201ENST00000511084 513 ntBASIC2.54□□□□□ -2
TPRP12270 AC022069.1-201ENST00000582910 658 ntBASIC2.54□□□□□ -2
TPRP12270 AC010928.3-201ENST00000587712 541 ntBASIC2.54□□□□□ -2
TPRP12270 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.54□□□□□ -2
TPRP12270 AC128687.1-201ENST00000605304 619 ntBASIC2.54□□□□□ -2
TPRP12270 AC093673.2-201ENST00000609674 331 ntBASIC2.54□□□□□ -2
TPRP12270 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TPRP12270 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TPRP12270 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TPRP12270 RNU1-112P-201ENST00000364401 164 ntBASIC2.54□□□□□ -2
TPRP12270 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TPRP12270 AC110754.1-201ENST00000399740 601 ntBASIC2.54□□□□□ -2
TPRP12270 LAP3P1-201ENST00000403648 294 ntBASIC2.54□□□□□ -2
TPRP12270 AC127526.1-201ENST00000417526 366 ntBASIC2.54□□□□□ -2
TPRP12270 RPL31P12-201ENST00000422587 358 ntBASIC2.54□□□□□ -2
TPRP12270 AC108667.1-201ENST00000428618 249 ntBASIC2.54□□□□□ -2
TPRP12270 RPL23AP22-201ENST00000437556 453 ntBASIC2.54□□□□□ -2
TPRP12270 RPL12P25-201ENST00000455592 494 ntBASIC2.54□□□□□ -2
TPRP12270 RN7SL442P-201ENST00000473804 320 ntBASIC2.54□□□□□ -2
TPRP12270 AC108078.2-201ENST00000510750 236 ntBASIC2.54□□□□□ -2
TPRP12270 RNA5SP217-201ENST00000515959 91 ntBASIC2.54□□□□□ -2
TPRP12270 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.54□□□□□ -2
TPRP12270 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TPRP12270 AL109809.4-201ENST00000603520 2185 ntBASIC2.54□□□□□ -2
TPRP12270 AL136964.1-201ENST00000622038 2990 ntBASIC2.54□□□□□ -2
TPRP12270 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TPRP12270 RNU1-17P-201ENST00000363022 152 ntBASIC2.53□□□□□ -2
TPRP12270 AC007677.1-201ENST00000445757 515 ntBASIC2.53□□□□□ -2
TPRP12270 HMGN1P5-201ENST00000448591 263 ntBASIC2.53□□□□□ -2
TPRP12270 MRPS31P2-201ENST00000451581 518 ntBASIC2.53□□□□□ -2
TPRP12270 RN7SL283P-201ENST00000489055 303 ntBASIC2.53□□□□□ -2
TPRP12270 AC092436.3-201ENST00000511788 257 ntBASIC2.53□□□□□ -2
TPRP12270 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms