Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
TOP2AP11388 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TOP2AP11388 Z73965.1-201ENST00000623412 2297 ntBASIC4.32□□□□□ -1.72
TOP2AP11388 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP2AP11388 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.31□□□□□ -1.72
TOP2AP11388 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.31□□□□□ -1.72
TOP2AP11388 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 RPL23AP45-201ENST00000476406 468 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 AC021146.5-201ENST00000503544 545 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 AC123904.3-201ENST00000547218 814 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP2AP11388 RPL23AP84-201ENST00000571193 464 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 MIR1291-201ENST00000627649 87 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TOP2AP11388 AC009487.4-201ENST00000624969 3585 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP2AP11388 MTND5P6-201ENST00000422338 1798 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TOP2AP11388 RNA5SP456-201ENST00000364002 114 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TOP2AP11388 MIR1183-201ENST00000408856 89 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 RPS20P25-201ENST00000412447 352 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 USP9YP20-201ENST00000419224 558 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 AC096638.1-201ENST00000444678 216 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP2AP11388 AF186190.1-201ENST00000517470 480 ntBASIC4.31□□□□□ -1.72
TOP2AP11388 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP2AP11388 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP2AP11388 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.31□□□□□ -1.72
TOP2AP11388 XPOTP1-201ENST00000443317 2398 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
TOP2AP11388 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP2AP11388 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TOP2AP11388 SNORD114-30-201ENST00000364448 72 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP2AP11388 RPL23AP74-201ENST00000437246 471 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 AL603825.1-201ENST00000438481 80 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 HMGB3P8-201ENST00000449709 577 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 RPL23AP14-201ENST00000468281 468 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 AC011037.1-201ENST00000483964 558 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 MIR5092-201ENST00000583139 88 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.3□□□□□ -1.72
TOP2AP11388 AC068313.1-201ENST00000604028 1008 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.3□□□□□ -1.72
TOP2AP11388 AC069528.2-201ENST00000624849 1991 ntBASIC4.3□□□□□ -1.72
TOP2AP11388 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TOP2AP11388 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TOP2AP11388 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.29□□□□□ -1.72
TOP2AP11388 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.29□□□□□ -1.72
TOP2AP11388 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TOP2AP11388 RNU1-73P-201ENST00000383971 164 ntBASIC4.29□□□□□ -1.72
TOP2AP11388 AL024474.1-201ENST00000404655 591 ntBASIC4.29□□□□□ -1.72
TOP2AP11388 HMGB3P12-201ENST00000438745 556 ntBASIC4.29□□□□□ -1.72
TOP2AP11388 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TOP2AP11388 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TOP2AP11388 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.29□□□□□ -1.72
TOP2AP11388 YWHAZP1-201ENST00000556286 722 ntBASIC4.29□□□□□ -1.72
TOP2AP11388 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.29□□□□□ -1.72
TOP2AP11388 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TOP2AP11388 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TOP2AP11388 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TOP2AP11388 AL034379.1-201ENST00000423216 253 ntBASIC4.28□□□□□ -1.72
TOP2AP11388 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.28□□□□□ -1.72
TOP2AP11388 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.28□□□□□ -1.72
TOP2AP11388 AP001207.1-201ENST00000524051 481 ntBASIC4.28□□□□□ -1.72
TOP2AP11388 MIR4644-201ENST00000579929 84 ntBASIC4.28□□□□□ -1.72
TOP2AP11388 AC131238.1-201ENST00000617135 328 ntBASIC4.28□□□□□ -1.72
TOP2AP11388 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP2AP11388 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP2AP11388 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TOP2AP11388 SNORD114-1-201ENST00000362705 72 ntBASIC4.27□□□□□ -1.73
TOP2AP11388 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TOP2AP11388 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP2AP11388 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP2AP11388 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TOP2AP11388 ST13P20-201ENST00000447996 1065 ntBASIC4.27□□□□□ -1.73
TOP2AP11388 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.27□□□□□ -1.73
TOP2AP11388 GAPDHP39-201ENST00000481866 979 ntBASIC4.27□□□□□ -1.73
TOP2AP11388 RNU6-991P-201ENST00000516168 107 ntBASIC4.27□□□□□ -1.73
TOP2AP11388 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP2AP11388 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.27□□□□□ -1.73
TOP2AP11388 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TOP2AP11388 AL450472.3-201ENST00000615578 367 ntBASIC4.27□□□□□ -1.73
TOP2AP11388 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TOP2AP11388 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP2AP11388 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP2AP11388 RNA5SP210-201ENST00000391034 120 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TOP2AP11388 IPMKP1-201ENST00000425988 855 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 Z99127.2-201ENST00000441426 334 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 IFNA11P-201ENST00000446352 526 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 AL353705.4-201ENST00000449661 238 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 RPL9P32-201ENST00000464118 620 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 VN1R17P-201ENST00000472048 1090 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.26□□□□□ -1.73
TOP2AP11388 CKS1BP7-201ENST00000522230 235 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TOP2AP11388 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP2AP11388 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.26□□□□□ -1.73
TOP2AP11388 AC090312.2-201ENST00000582687 378 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms