Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.28□□□□□ -2.04
CXCL1P09341 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL1P09341 AL160237.3-201ENST00000604114 1013 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC069200.1-201ENST00000609511 323 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC068831.7-201ENST00000616954 363 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 U73479.1-201ENST00000618062 168 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC010338.1-201ENST00000621823 717 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC006963.1-201ENST00000624003 1052 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL1P09341 MIR622-201ENST00000638396 96 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL1P09341 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL1P09341 MAPK10-266ENST00000641066 6555 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.28□□□□□ -2.05
CXCL1P09341 NSRP1P1-201ENST00000444067 1693 ntBASIC2.28□□□□□ -2.05
CXCL1P09341 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 RNU6-50P-201ENST00000362356 103 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 RNU6-670P-201ENST00000364312 104 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CXCL1P09341 DEFA7P-201ENST00000382676 285 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 RNU6-629P-201ENST00000384061 103 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 CASKP1-201ENST00000412870 582 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL1P09341 RPS7P2-201ENST00000435134 607 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC129850.1-201ENST00000436203 508 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 HMGB1P48-201ENST00000446155 598 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 ST13P20-201ENST00000447996 1065 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL1P09341 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL1P09341 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.27□□□□□ -2.05
CXCL1P09341 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC016065.2-201ENST00000514530 444 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC008562.1-201ENST00000521763 330 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 HSPE1P20-201ENST00000538133 289 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AL133271.1-201ENST00000538229 291 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.27□□□□□ -2.05
CXCL1P09341 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL1P09341 AL110115.1-201ENST00000614396 364 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AC009464.1-201ENST00000615731 469 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 CYCSP41-201ENST00000616920 296 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL1P09341 AC091046.2-201ENST00000620775 665 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 AC022509.4-201ENST00000621404 572 ntBASIC2.27□□□□□ -2.05
CXCL1P09341 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CXCL1P09341 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL1P09341 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL1P09341 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CXCL1P09341 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.27□□□□□ -2.05
CXCL1P09341 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.26□□□□□ -2.05
CXCL1P09341 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL1P09341 METTL21EP-201ENST00000298105 713 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL1P09341 MIR218-2-201ENST00000385006 110 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 SSXP9-201ENST00000417503 292 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 SYF2P2-201ENST00000417620 583 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 BX842559.1-201ENST00000419615 532 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL1P09341 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL1P09341 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.26□□□□□ -2.05
CXCL1P09341 AL606490.7-201ENST00000433136 191 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AL035246.1-201ENST00000433554 1255 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AC005019.1-201ENST00000436455 431 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL1P09341 Z99127.2-201ENST00000441426 334 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 TPTE2P6-202ENST00000445572 1007 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 RPL6P5-201ENST00000445678 828 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AL035407.2-201ENST00000454090 378 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL1P09341 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL1P09341 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.26□□□□□ -2.05
CXCL1P09341 PRDX3P4-201ENST00000470828 747 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL1P09341 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.26□□□□□ -2.05
CXCL1P09341 AC104115.2-201ENST00000523026 687 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.26□□□□□ -2.05
CXCL1P09341 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL1P09341 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL1P09341 AC023158.1-201ENST00000561632 1025 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 MIR5186-201ENST00000577504 120 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AL162713.1-201ENST00000604480 262 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AC073387.2-201ENST00000604797 784 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AC090115.4-201ENST00000609970 188 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AC083809.1-201ENST00000615051 472 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 AC138932.5-201ENST00000617759 563 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms