Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL355578.1-201ENST00000607405 1328 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 FAM91A3P-201ENST00000456826 2544 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 RNU6-115P-201ENST00000364310 107 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 Y_RNA.493-201ENST00000384422 102 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 MT-TC-201ENST00000387405 66 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 OR8G2P-201ENST00000412796 908 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AL136133.1-201ENST00000413694 376 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 BTF3P8-201ENST00000414577 526 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 MTCYBP24-201ENST00000420387 1106 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 SDCBPP2-201ENST00000424643 885 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 RSL24D1P6-201ENST00000426934 401 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 OR2AS1P-201ENST00000427827 319 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AL117339.2-201ENST00000430475 180 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 ARF4P4-201ENST00000439608 520 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AL645931.1-201ENST00000439737 410 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 HMGB3P11-201ENST00000440127 604 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 HSFY6P-201ENST00000445573 403 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC078918.1-201ENST00000498515 228 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC084024.2-201ENST00000503480 791 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC069306.1-201ENST00000507006 843 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 POU5F1P7-201ENST00000508759 541 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 RNA5SP135-201ENST00000517019 125 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC023632.1-201ENST00000518463 375 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 MTND2P7-201ENST00000521337 640 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 OR8I1P-201ENST00000529291 931 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC025884.1-201ENST00000556034 378 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 OR4H12P-201ENST00000556269 907 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC055876.1-202ENST00000567053 138 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC104072.1-201ENST00000568817 668 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 MIR4286-201ENST00000580651 93 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 VN1R87P-201ENST00000596706 487 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 SNRPGP15-201ENST00000600149 222 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC113368.1-201ENST00000603736 382 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC068722.2-201ENST00000618734 544 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC007275.1-201ENST00000621243 671 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 PLCE1P1-201ENST00000622094 305 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AP003355.3-201ENST00000623465 114 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC080188.3-201ENST00000624842 748 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AC126544.2-201ENST00000625174 749 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 AL672296.1-201ENST00000427780 2158 ntBASIC2.61□□□□□ -1.99
HLA-DQA1P01909 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQA1P01909 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MTND5P19-201ENST00000424872 1794 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 ZNF734P-201ENST00000419494 1534 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MIR372-201ENST00000362225 67 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MIR217-201ENST00000384817 110 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 SNORA48.8-201ENST00000391324 134 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AL133264.1-201ENST00000407157 562 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MIR1250-201ENST00000408098 113 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC096533.1-201ENST00000411645 353 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MTND2P16-201ENST00000419987 799 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 Z93242.1-201ENST00000427102 353 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms