Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 OR4H6P-202ENST00000603819 340 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTDNEP1O95476 AC025016.1-201ENST00000616746 682 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 AL645568.2-201ENST00000432815 1337 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTDNEP1O95476 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 AC096644.4-201ENST00000563417 2912 ntBASIC3.32□□□□□ -1.88
CTDNEP1O95476 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CTDNEP1O95476 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTDNEP1O95476 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC073346.2-201ENST00000624724 2058 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC138915.3-201ENST00000562908 1389 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC009501.3-201ENST00000605001 1352 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTDNEP1O95476 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTDNEP1O95476 RPL9P7-201ENST00000330965 580 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 SNORD51.1-201ENST00000365405 77 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 MIR512-1-201ENST00000384913 84 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 HSPE1P26-201ENST00000405341 275 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 HMGB1P13-201ENST00000406019 642 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC004022.2-201ENST00000413824 193 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AL049610.1-201ENST00000423374 372 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 MORF4L1P7-201ENST00000426038 703 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 MTND2P21-201ENST00000436242 1042 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 MTND4P15-201ENST00000437913 1033 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 HMGN2P21-201ENST00000447764 270 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 RPL29P29-201ENST00000448725 423 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 MTND2P8-201ENST00000450555 1025 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC003982.1-202ENST00000469928 248 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 RPS4XP13-201ENST00000483219 789 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 RNU6-1004P-201ENST00000516584 111 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AP002404.1-201ENST00000532005 451 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 CYCSP39-201ENST00000565821 309 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC006254.3-201ENST00000603353 884 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC105429.2-201ENST00000610567 517 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AP006248.3-201ENST00000623580 594 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 AC091152.2-201ENST00000591628 2569 ntBASIC3.31□□□□□ -1.88
CTDNEP1O95476 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTDNEP1O95476 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTDNEP1O95476 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTDNEP1O95476 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTDNEP1O95476 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTDNEP1O95476 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTDNEP1O95476 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTDNEP1O95476 SNORA51.4-201ENST00000364993 124 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 SNORA70.4-201ENST00000365509 134 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTDNEP1O95476 SNORA18.3-201ENST00000384122 132 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AL138885.1-201ENST00000405921 675 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 SNORA11C-201ENST00000408532 129 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 RPL35AP12-201ENST00000425362 338 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AL592437.1-201ENST00000443781 492 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 RSL24D1P3-201ENST00000449255 495 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 S100A11P2-201ENST00000467589 312 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 SUMO1P1-201ENST00000497904 306 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 SLC25A15P5-201ENST00000508033 253 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 AC091826.1-201ENST00000514065 313 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 FAM60DP-201ENST00000524174 632 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 MIR4325-201ENST00000583049 90 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 AC090525.3-201ENST00000605601 189 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 RNA5SP108-201ENST00000605921 117 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AC005046.1-201ENST00000608515 625 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 AC010338.1-201ENST00000621823 717 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AC048347.1-201ENST00000624621 427 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 AL356094.1-201ENST00000624663 1212 ntBASIC3.3□□□□□ -1.88
CTDNEP1O95476 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.3□□□□□ -1.88
CTDNEP1O95476 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTDNEP1O95476 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms