Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 ATP5A1P2-201ENST00000412323 255 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 RPL23AP39-201ENST00000415533 405 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 AL121878.1-201ENST00000418638 859 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 AL589823.1-201ENST00000429577 183 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AC072039.1-201ENST00000477611 581 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 UBA52P3-201ENST00000491303 382 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 RNU6-488P-201ENST00000515918 99 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 AL359715.5-201ENST00000623431 443 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 AC099063.3-201ENST00000642066 185 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAPGEF3O95398 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAPGEF3O95398 MFSD8-236ENST00000641509 4050 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 MTND4P5-201ENST00000435821 1374 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.89□□□□□ -1.47
RAPGEF3O95398 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.89□□□□□ -1.47
RAPGEF3O95398 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAPGEF3O95398 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 MAPK10-286ENST00000641208 8747 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 Y_RNA.25-201ENST00000362528 102 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 SNORA26.8-201ENST00000391306 124 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 AL121978.1-201ENST00000402778 359 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 MIR1284-201ENST00000408337 120 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 RNA5SP120-201ENST00000410900 112 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 PIGPP2-201ENST00000411569 458 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 FCF1P2-201ENST00000415284 583 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 HMGN2P27-201ENST00000427352 270 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 IFNNP1-201ENST00000429219 553 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 OR7K1P-201ENST00000546439 926 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 AC009852.2-201ENST00000567898 485 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 AC012435.1-202ENST00000568772 240 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 AC011260.1-201ENST00000578420 472 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 PSMA6P4-201ENST00000603247 718 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 AC026585.1-201ENST00000619582 524 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 MIR8057-201ENST00000620957 69 ntBASIC5.88□□□□□ -1.47
RAPGEF3O95398 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RAPGEF3O95398 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAPGEF3O95398 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAPGEF3O95398 RNU6-178P-201ENST00000384631 104 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 MIR506-201ENST00000384998 124 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AL031779.1-201ENST00000415663 330 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AC092634.6-201ENST00000418558 192 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 MTCO3P1-205ENST00000422088 832 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 USP9YP28-201ENST00000435142 589 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AC092641.1-201ENST00000440229 772 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 MTND1P30-201ENST00000441241 901 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 RAB11AP1-201ENST00000442978 646 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AL589765.3-201ENST00000446084 462 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 NDUFA5P7-201ENST00000452914 242 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 FABP3P2-201ENST00000453169 399 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 RNU6-347P-201ENST00000516658 105 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 Y_RNA.695-201ENST00000516715 107 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 ARL2BPP5-201ENST00000523141 481 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AC012213.3-201ENST00000577199 777 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AC011816.2-201ENST00000607089 556 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AL353600.1-201ENST00000608148 251 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAPGEF3O95398 AC092650.2-201ENST00000619984 902 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAPGEF3O95398 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAPGEF3O95398 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAPGEF3O95398 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAPGEF3O95398 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAPGEF3O95398 SMG1P4-204ENST00000523028 4131 ntBASIC5.87□□□□□ -1.47
RAPGEF3O95398 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAPGEF3O95398 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.87□□□□□ -1.47
RAPGEF3O95398 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAPGEF3O95398 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAPGEF3O95398 AL672167.1-206ENST00000356293 943 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 RNA5SP187-201ENST00000384400 119 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms