Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RBBP4P6-201ENST00000508098 202 ntBASIC6.79□□□□□ -1.32
RNF40O75150 RNU2-69P-201ENST00000516061 100 ntBASIC6.79□□□□□ -1.32
RNF40O75150 SNORA31.6-201ENST00000516241 130 ntBASIC6.79□□□□□ -1.32
RNF40O75150 HMGN1P28-201ENST00000521340 364 ntBASIC6.79□□□□□ -1.32
RNF40O75150 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF40O75150 AL133153.1-201ENST00000557756 303 ntBASIC6.79□□□□□ -1.32
RNF40O75150 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF40O75150 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.79□□□□□ -1.32
RNF40O75150 MIR4502-201ENST00000580432 81 ntBASIC6.79□□□□□ -1.32
RNF40O75150 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF40O75150 VN1R91P-201ENST00000594377 169 ntBASIC6.79□□□□□ -1.32
RNF40O75150 SMIM12P1-201ENST00000603004 274 ntBASIC6.79□□□□□ -1.32
RNF40O75150 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF40O75150 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF40O75150 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF40O75150 AC079753.1-201ENST00000623243 3868 ntBASIC6.79□□□□□ -1.32
RNF40O75150 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
RNF40O75150 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RNF40O75150 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RNF40O75150 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RNF40O75150 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
RNF40O75150 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 AC010401.2-201ENST00000575137 4934 ntBASIC6.78□□□□□ -1.32
RNF40O75150 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF40O75150 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF40O75150 Y_RNA.65-201ENST00000362846 100 ntBASIC6.78□□□□□ -1.32
RNF40O75150 RNU6-682P-201ENST00000363843 106 ntBASIC6.78□□□□□ -1.32
RNF40O75150 Y_RNA.269-201ENST00000364685 89 ntBASIC6.78□□□□□ -1.32
RNF40O75150 SNORA51.11-201ENST00000384442 131 ntBASIC6.78□□□□□ -1.32
RNF40O75150 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 MIR1298-201ENST00000408783 112 ntBASIC6.78□□□□□ -1.32
RNF40O75150 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF40O75150 AL360081.1-201ENST00000428299 555 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AC007679.3-201ENST00000434035 414 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF40O75150 COX4I1P2-201ENST00000447446 547 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 RPS29P26-201ENST00000477483 171 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF40O75150 ATP5LP5-201ENST00000483050 299 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 AC114728.1-201ENST00000488289 483 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF40O75150 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF40O75150 RN7SKP96-201ENST00000516948 297 ntBASIC6.78□□□□□ -1.32
RNF40O75150 RNU6-1092P-201ENST00000516955 87 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AP006587.4-201ENST00000526053 529 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF40O75150 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RNF40O75150 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 AC002310.3-201ENST00000569728 723 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF40O75150 MIR4293-201ENST00000584305 78 ntBASIC6.78□□□□□ -1.32
RNF40O75150 AP001823.1-201ENST00000604056 1003 ntBASIC6.78□□□□□ -1.32
RNF40O75150 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF40O75150 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF40O75150 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF40O75150 SMG1P5-202ENST00000529428 4219 ntBASIC6.77□□□□□ -1.32
RNF40O75150 SMG1P2-201ENST00000566127 4221 ntBASIC6.77□□□□□ -1.32
RNF40O75150 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
RNF40O75150 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RNF40O75150 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF40O75150 AC130650.2-201ENST00000618736 2403 ntBASIC6.77□□□□□ -1.33
RNF40O75150 AC011455.2-201ENST00000599320 3336 ntBASIC6.77□□□□□ -1.33
RNF40O75150 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 AC140134.1-201ENST00000511830 3544 ntBASIC6.77□□□□□ -1.33
RNF40O75150 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 GNG5P2-201ENST00000372054 207 ntBASIC6.77□□□□□ -1.33
RNF40O75150 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 MIR188-201ENST00000385034 86 ntBASIC6.77□□□□□ -1.33
RNF40O75150 RNU6-278P-201ENST00000390945 109 ntBASIC6.77□□□□□ -1.33
RNF40O75150 RPL23AP17-201ENST00000401064 499 ntBASIC6.77□□□□□ -1.33
RNF40O75150 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RNF40O75150 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF40O75150 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF40O75150 AL663061.1-201ENST00000416625 580 ntBASIC6.77□□□□□ -1.33
RNF40O75150 UBE2D3P2-201ENST00000424409 445 ntBASIC6.77□□□□□ -1.33
RNF40O75150 AC108479.1-201ENST00000431142 427 ntBASIC6.77□□□□□ -1.33
RNF40O75150 AL645568.3-201ENST00000433683 316 ntBASIC6.77□□□□□ -1.33
RNF40O75150 SNORD121B-201ENST00000458838 81 ntBASIC6.77□□□□□ -1.33
RNF40O75150 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF40O75150 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF40O75150 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 VN1R84P-201ENST00000593697 235 ntBASIC6.77□□□□□ -1.33
RNF40O75150 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms