Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SSSCA1O60232 MIR6073-201ENST00000352083 89 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 RNU1-64P-201ENST00000365443 163 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 RNU2-71P-201ENST00000411395 189 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 EIF2S2P3-201ENST00000428356 999 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.17□□□□□ -2.06
SSSCA1O60232 AC093716.1-201ENST00000435923 377 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.17□□□□□ -2.06
SSSCA1O60232 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.17□□□□□ -2.06
SSSCA1O60232 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.17□□□□□ -2.06
SSSCA1O60232 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.17□□□□□ -2.06
SSSCA1O60232 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.17□□□□□ -2.06
SSSCA1O60232 RPL37P3-201ENST00000456825 293 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC021205.1-201ENST00000468797 348 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC104472.2-201ENST00000469035 601 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 KC877373.1-201ENST00000479066 408 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC083906.5-201ENST00000503722 328 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC010285.3-201ENST00000511668 676 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.17□□□□□ -2.06
SSSCA1O60232 HMGB1P41-201ENST00000520234 440 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.17□□□□□ -2.06
SSSCA1O60232 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC123904.3-201ENST00000547218 814 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC125611.2-201ENST00000551907 647 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.17□□□□□ -2.06
SSSCA1O60232 AC138761.3-201ENST00000579993 334 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC009303.3-201ENST00000591103 736 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 HMGN2P28-201ENST00000606102 262 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.17□□□□□ -2.06
SSSCA1O60232 AC084036.1-201ENST00000609190 508 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.17□□□□□ -2.06
SSSCA1O60232 SNHG22-203ENST00000617833 660 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 AC139769.3-201ENST00000618383 175 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SSSCA1O60232 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.17□□□□□ -2.06
SSSCA1O60232 AC000403.1-201ENST00000613696 3585 ntBASIC2.17□□□□□ -2.06
SSSCA1O60232 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SSSCA1O60232 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SSSCA1O60232 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SSSCA1O60232 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SSSCA1O60232 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
SSSCA1O60232 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SSSCA1O60232 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SSSCA1O60232 RNA5SP181-201ENST00000410246 98 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 RNA5SP492-201ENST00000411330 114 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AC092638.1-201ENST00000411966 1275 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AC109780.2-201ENST00000413467 845 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 ATG3P1-201ENST00000419507 911 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AC073310.1-201ENST00000423226 1033 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AC127537.2-201ENST00000439258 465 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 H2AFZP6-201ENST00000444403 394 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SSSCA1O60232 AL359073.1-201ENST00000448036 403 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 RAB28P3-201ENST00000448325 597 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.16□□□□□ -2.06
SSSCA1O60232 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AP001025.2-201ENST00000490908 477 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AL133372.1-201ENST00000493565 745 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 RN7SL504P-201ENST00000494496 287 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 RPL30P11-201ENST00000495304 339 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 RPS27P27-201ENST00000498779 255 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.16□□□□□ -2.06
SSSCA1O60232 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AC111000.2-201ENST00000507775 550 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.16□□□□□ -2.06
SSSCA1O60232 PSMA2P1-201ENST00000526365 646 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.16□□□□□ -2.06
SSSCA1O60232 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SSSCA1O60232 OR6C73P-201ENST00000546432 358 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AC024153.1-201ENST00000603103 365 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 CYCSP41-201ENST00000616920 296 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.16□□□□□ -2.06
SSSCA1O60232 AC091046.2-201ENST00000620775 665 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 AC016717.3-201ENST00000624730 554 ntBASIC2.16□□□□□ -2.06
SSSCA1O60232 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.16□□□□□ -2.06
SSSCA1O60232 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSSCA1O60232 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.16□□□□□ -2.06
SSSCA1O60232 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SSSCA1O60232 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SSSCA1O60232 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
SSSCA1O60232 MIR200C-201ENST00000384980 68 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 AL139095.1-201ENST00000404326 391 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.15□□□□□ -2.07
SSSCA1O60232 AC112220.1-201ENST00000434628 355 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 Z96811.1-201ENST00000445880 108 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SSSCA1O60232 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.15□□□□□ -2.07
SSSCA1O60232 AC146507.1-201ENST00000468335 354 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.15□□□□□ -2.07
SSSCA1O60232 AC020898.1-201ENST00000474167 787 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 RPS3AP43-201ENST00000479743 781 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 HMGB1P3-201ENST00000502802 616 ntBASIC2.15□□□□□ -2.07
SSSCA1O60232 AC093755.1-201ENST00000512950 1023 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms