Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC093677.1-201ENST00000514414 678 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC093853.1-201ENST00000515689 483 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 RAB9BP1-201ENST00000519581 626 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF3O43395 OR5AP1P-201ENST00000529730 940 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF3O43395 OR6C7P-201ENST00000547875 934 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF3O43395 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.94□□□□□ -1.62
PRPF3O43395 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF3O43395 MIR4284-201ENST00000578924 81 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 ELOCP28-201ENST00000590044 317 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AL669831.4-202ENST00000590817 238 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF3O43395 AC245008.1-201ENST00000608123 476 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 FAM27D1-201ENST00000612308 341 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AC114781.5-201ENST00000615297 108 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 AL596245.1-201ENST00000618994 362 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
PRPF3O43395 AC021755.1-201ENST00000559747 1447 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF3O43395 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF3O43395 AL031985.3-201ENST00000565390 2449 ntBASIC4.94□□□□□ -1.62
PRPF3O43395 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF3O43395 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF3O43395 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF3O43395 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PRPF3O43395 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF3O43395 RNU6-433P-201ENST00000363216 104 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 RNU4-91P-201ENST00000364778 135 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 RNA5SP366-201ENST00000365454 123 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF3O43395 SNORD51-201ENST00000384320 80 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 RNU6-952P-201ENST00000391164 108 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PRPF3O43395 AL021407.1-201ENST00000404531 386 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 RNU2-15P-201ENST00000410692 191 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 AIMP1P1-201ENST00000418670 937 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF3O43395 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF3O43395 PSMA6P3-201ENST00000428242 164 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 PRELID3BP10-201ENST00000431957 584 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF3O43395 AL022578.1-201ENST00000439330 1433 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF3O43395 SNRPFP4-201ENST00000456366 242 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 AC041039.1-201ENST00000485656 536 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 AC093840.1-201ENST00000511599 336 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 EEF1B2P4-201ENST00000551398 348 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF3O43395 AL022161.1-201ENST00000604390 213 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 OR2AS2P-201ENST00000606902 342 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 AC092653.1-201ENST00000608509 531 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 OR6R2P-201ENST00000609216 300 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 AL731566.2-201ENST00000618971 317 ntBASIC4.93□□□□□ -1.62
PRPF3O43395 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PRPF3O43395 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PRPF3O43395 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF3O43395 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF3O43395 CR383658.2-201ENST00000547576 1525 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF3O43395 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF3O43395 AC126755.2-208ENST00000327792 462 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AC138969.1-213ENST00000331436 462 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
PRPF3O43395 MIR124-3-201ENST00000384866 87 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 MIR141-201ENST00000384975 95 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 RPS23P10-201ENST00000416185 486 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AL389915.1-201ENST00000422463 466 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 RPS27AP14-201ENST00000422868 454 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 RWDD4P2-201ENST00000426392 563 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AL590233.1-201ENST00000430017 456 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF3O43395 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF3O43395 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF3O43395 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF3O43395 SNORD108-201ENST00000459332 71 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 snoU13.3-201ENST00000459441 104 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AP001992.1-205ENST00000462248 379 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF3O43395 RPS26P28-201ENST00000470806 348 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF3O43395 RN7SL481P-201ENST00000477764 299 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AC034222.1-201ENST00000494052 532 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AC012170.1-201ENST00000495139 359 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF3O43395 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF3O43395 RNA5SP519-201ENST00000516480 119 ntBASIC4.92□□□□□ -1.62
PRPF3O43395 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF3O43395 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms