Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC104978.1-201ENST00000449387 391 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.44□□□□□ -2.02
SDCBPO00560 BX510359.1-201ENST00000456973 237 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 ARPC3P2-201ENST00000457786 533 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC146507.1-201ENST00000468335 354 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC117440.1-201ENST00000474107 571 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 NCOR1P1-202ENST00000486162 291 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC006483.1-201ENST00000487308 313 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.44□□□□□ -2.02
SDCBPO00560 DYNLL1P6-201ENST00000503440 264 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.44□□□□□ -2.02
SDCBPO00560 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.44□□□□□ -2.02
SDCBPO00560 AC093755.1-201ENST00000512950 1023 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC008885.1-201ENST00000514930 301 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.44□□□□□ -2.02
SDCBPO00560 AC009812.2-201ENST00000517657 457 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.44□□□□□ -2.02
SDCBPO00560 AC107016.2-201ENST00000547968 190 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.44□□□□□ -2.02
SDCBPO00560 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 MIR3944-201ENST00000581277 108 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC015871.2-201ENST00000603605 948 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.44□□□□□ -2.02
SDCBPO00560 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SDCBPO00560 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SDCBPO00560 AL355493.4-201ENST00000618530 292 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC092184.1-201ENST00000625042 715 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AL035425.3-201ENST00000564206 4996 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SDCBPO00560 API5P2-201ENST00000397055 1498 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.44□□□□□ -2.02
SDCBPO00560 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.44□□□□□ -2.02
SDCBPO00560 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SDCBPO00560 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SDCBPO00560 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SDCBPO00560 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SDCBPO00560 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 SNORA9.2-201ENST00000365361 133 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 U8.9-201ENST00000365667 134 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 SNORA54-201ENST00000384281 123 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 RNU6-185P-201ENST00000384421 107 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 HNRNPDP2-201ENST00000406475 478 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 DUTP6-201ENST00000425573 462 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AL445528.1-201ENST00000426330 420 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 Z85994.2-201ENST00000434327 452 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 RPL23AP33-201ENST00000442301 452 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 COX6CP2-201ENST00000444980 225 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 HMGB1P26-201ENST00000452520 628 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 GSTA11P-201ENST00000452866 669 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 RPL31P13-201ENST00000484151 370 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 RPL9P33-201ENST00000484311 566 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SDCBPO00560 AC117525.1-201ENST00000515228 503 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.43□□□□□ -2.02
SDCBPO00560 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 OR8L1P-201ENST00000534005 955 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.43□□□□□ -2.02
SDCBPO00560 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.43□□□□□ -2.02
SDCBPO00560 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.43□□□□□ -2.02
SDCBPO00560 AL157394.1-201ENST00000562983 1224 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 MIR3690-201ENST00000580266 75 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 AC078899.3-201ENST00000599065 212 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AL392112.1-201ENST00000605115 829 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AC090425.2-201ENST00000608818 501 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 AC090115.4-201ENST00000609970 188 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 AC123912.3-201ENST00000600907 1367 ntBASIC2.43□□□□□ -2.02
SDCBPO00560 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
SDCBPO00560 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.43□□□□□ -2.02
SDCBPO00560 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SDCBPO00560 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.43□□□□□ -2.02
SDCBPO00560 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SDCBPO00560 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.42□□□□□ -2.02
SDCBPO00560 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SDCBPO00560 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SDCBPO00560 RNU6-600P-201ENST00000362524 99 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 MIR512-1-201ENST00000384913 84 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AL031121.1-201ENST00000406553 254 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.42□□□□□ -2.02
SDCBPO00560 AL389915.1-201ENST00000422463 466 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.42□□□□□ -2.02
SDCBPO00560 AJ239321.1-201ENST00000424255 564 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 CKS1BP5-201ENST00000434172 273 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms