Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RPP40P2-201ENST00000603596 712 ntBASIC3.86□□□□□ -1.79
CCDC188H7C350 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC188H7C350 AC083809.1-201ENST00000615051 472 ntBASIC3.86□□□□□ -1.79
CCDC188H7C350 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC188H7C350 OR4G3P-201ENST00000633500 913 ntBASIC3.86□□□□□ -1.79
CCDC188H7C350 MTND2P41-201ENST00000637599 773 ntBASIC3.86□□□□□ -1.79
CCDC188H7C350 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC188H7C350 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC188H7C350 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC188H7C350 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC188H7C350 AL157700.1-201ENST00000561973 1432 ntBASIC3.86□□□□□ -1.79
CCDC188H7C350 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC188H7C350 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC188H7C350 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 SNORA70.2-201ENST00000364506 135 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 RNA5SP235-201ENST00000365411 114 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC188H7C350 RNU6-636P-201ENST00000384598 107 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 RNU6-821P-201ENST00000390995 107 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 RNU6-584P-201ENST00000410350 95 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC188H7C350 EXTL2P1-201ENST00000446218 416 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 RPL5P32-201ENST00000454085 879 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AC011979.1-201ENST00000472300 483 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 NIPA2P2-201ENST00000496376 1083 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 OR4P1P-201ENST00000530808 1136 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC188H7C350 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AL132857.1-201ENST00000555180 708 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AL132657.2-201ENST00000564417 358 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AL049634.3-201ENST00000604968 457 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AC016877.3-201ENST00000606778 504 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC188H7C350 AC090772.4-201ENST00000623599 362 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 AC112200.1-201ENST00000625015 234 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC188H7C350 OR52H1-202ENST00000641796 1061 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CCDC188H7C350 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
CCDC188H7C350 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC188H7C350 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC188H7C350 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC188H7C350 AC126755.2-208ENST00000327792 462 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC138969.1-213ENST00000331436 462 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 RNU6-600P-201ENST00000362524 99 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 RNU6-989P-201ENST00000362756 107 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 RNU6-1181P-201ENST00000384191 106 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 RPL31P1-201ENST00000398116 372 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AL049693.1-201ENST00000402760 611 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCDC188H7C350 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC188H7C350 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC188H7C350 AIMP1P1-201ENST00000418670 937 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 MRPS18BP2-201ENST00000434310 759 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AL138799.3-201ENST00000438968 350 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 SETD6P1-201ENST00000444575 317 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 NPM1P49-201ENST00000448027 714 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC188H7C350 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC188H7C350 MTND1P16-201ENST00000465177 898 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC026979.1-201ENST00000492525 396 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 FCF1P3-201ENST00000496394 590 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC188H7C350 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC188H7C350 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC188H7C350 AC022695.1-201ENST00000522089 237 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 SLC2A13P1-201ENST00000531560 322 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC005832.3-201ENST00000537929 631 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC188H7C350 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC188H7C350 CBX3P5-201ENST00000552017 521 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 PARP1P2-201ENST00000556806 195 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 MIR4277-201ENST00000578298 84 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 VN1R79P-201ENST00000593540 513 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC245884.10-201ENST00000597355 337 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 MTND3P19-201ENST00000603825 345 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AL592436.1-201ENST00000605135 558 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC027449.1-201ENST00000608890 407 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC090912.3-201ENST00000609775 533 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 AC006338.2-201ENST00000616864 791 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms