Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 snoU13.4-201ENST00000458916 104 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 snoU13.3-201ENST00000459441 104 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC008155.2-201ENST00000464337 397 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL30P14-201ENST00000482744 348 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 RN7SL20P-201ENST00000488827 297 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 SRIP1-201ENST00000489235 288 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 SNORA70.18-201ENST00000516696 98 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 HIGD1AP1-201ENST00000550979 275 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AGGF1P6-201ENST00000569213 976 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC009127.3-201ENST00000570531 403 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC103810.1-201ENST00000579873 453 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR4658-201ENST00000584344 65 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC067852.3-201ENST00000589177 561 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MTCO2P22-201ENST00000603246 681 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC110079.1-202ENST00000635213 138 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 OR52H1-202ENST00000641796 1061 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AL035425.3-201ENST00000564206 4996 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC005336.3-201ENST00000623833 2679 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 SNORD9-201ENST00000362566 104 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU6-1251P-201ENST00000364502 107 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU4-52P-201ENST00000384209 138 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR30B-201ENST00000384850 88 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL7P60-201ENST00000397636 735 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AL121972.1-201ENST00000402023 252 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU4-72P-201ENST00000410754 173 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL26P37-201ENST00000411983 438 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 USP9YP27-201ENST00000418455 438 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 DBIP2-201ENST00000419076 262 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC073143.1-201ENST00000436316 395 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AL121871.1-201ENST00000443413 436 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL6P5-201ENST00000445678 828 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL37P3-201ENST00000456825 293 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 snoU13.7-201ENST00000459220 104 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AL133162.1-201ENST00000463228 453 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL32P34-201ENST00000486380 400 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC008953.1-201ENST00000497334 318 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS27P27-201ENST00000498779 255 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 PRELID3BP6-201ENST00000503839 571 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC093720.1-201ENST00000505681 714 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU6-319P-201ENST00000516025 108 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 SNORA70.17-201ENST00000516449 133 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 SCARNA14-201ENST00000516903 136 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP471-201ENST00000516971 106 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AP003730.1-201ENST00000524605 285 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 NDUFS5P6-201ENST00000529136 295 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC137768.1-201ENST00000549998 553 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC126177.3-201ENST00000551839 688 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AMZ2P1-203ENST00000565833 850 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AL590392.1-201ENST00000604960 446 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC106028.5-201ENST00000610332 395 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR6780A-201ENST00000615089 68 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC009090.3-201ENST00000616553 565 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AL121890.3-201ENST00000618494 516 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 FP236240.3-201ENST00000623061 327 ntBASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHKB-CPT1BH3BT56 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms