Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap53Q9D439 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap53Q9D439 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap53Q9D439 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap53Q9D439 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cfap53Q9D439 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18■□□□□ 0.47
Cfap53Q9D439 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cfap53Q9D439 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Gm11336-201ENSMUST00000118168 334 ntBASIC18■□□□□ 0.47
Cfap53Q9D439 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18■□□□□ 0.47
Cfap53Q9D439 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cfap53Q9D439 AC122351.1-201ENSMUST00000220467 126 ntBASIC18■□□□□ 0.47
Cfap53Q9D439 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18■□□□□ 0.47
Cfap53Q9D439 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cfap53Q9D439 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap53Q9D439 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.99■□□□□ 0.47
Cfap53Q9D439 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.99■□□□□ 0.47
Cfap53Q9D439 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap53Q9D439 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Gm44450-201ENSMUST00000199528 114 ntBASIC17.98■□□□□ 0.47
Cfap53Q9D439 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.98■□□□□ 0.47
Cfap53Q9D439 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap53Q9D439 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Gm21559-201ENSMUST00000220638 855 ntBASIC17.97■□□□□ 0.47
Cfap53Q9D439 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Gm8587-201ENSMUST00000076538 843 ntBASIC17.97■□□□□ 0.47
Cfap53Q9D439 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap53Q9D439 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.96■□□□□ 0.47
Cfap53Q9D439 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap53Q9D439 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cfap53Q9D439 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms